Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.03■□□□□ 0.48
UBL4AP11441 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
UBL4AP11441 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBL4AP11441 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.03■□□□□ 0.48
UBL4AP11441 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
UBL4AP11441 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UBL4AP11441 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.03■□□□□ 0.48
UBL4AP11441 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBL4AP11441 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.03■□□□□ 0.48
UBL4AP11441 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.03■□□□□ 0.48
UBL4AP11441 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
UBL4AP11441 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBL4AP11441 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.02■□□□□ 0.48
UBL4AP11441 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.02■□□□□ 0.48
UBL4AP11441 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
UBL4AP11441 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.02■□□□□ 0.48
UBL4AP11441 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.02■□□□□ 0.48
UBL4AP11441 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
UBL4AP11441 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.02■□□□□ 0.48
UBL4AP11441 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBL4AP11441 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.02■□□□□ 0.48
UBL4AP11441 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
UBL4AP11441 KRT18P6-201ENST00000555540 1265 ntBASIC18.02■□□□□ 0.48
UBL4AP11441 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.02■□□□□ 0.48
UBL4AP11441 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBL4AP11441 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBL4AP11441 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.02■□□□□ 0.48
UBL4AP11441 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.02■□□□□ 0.47
UBL4AP11441 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.02■□□□□ 0.47
UBL4AP11441 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBL4AP11441 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBL4AP11441 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBL4AP11441 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBL4AP11441 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
UBL4AP11441 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBL4AP11441 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
UBL4AP11441 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
UBL4AP11441 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.01■□□□□ 0.47
UBL4AP11441 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.01■□□□□ 0.47
UBL4AP11441 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBL4AP11441 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UBL4AP11441 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
UBL4AP11441 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.01■□□□□ 0.47
UBL4AP11441 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.01■□□□□ 0.47
UBL4AP11441 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.01■□□□□ 0.47
UBL4AP11441 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
UBL4AP11441 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 TREX1-205ENST00000625293 1783 ntBASIC18.01■□□□□ 0.47
UBL4AP11441 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.01■□□□□ 0.47
UBL4AP11441 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBL4AP11441 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBL4AP11441 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18■□□□□ 0.47
UBL4AP11441 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18■□□□□ 0.47
UBL4AP11441 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4AP11441 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18■□□□□ 0.47
UBL4AP11441 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4AP11441 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4AP11441 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18■□□□□ 0.47
UBL4AP11441 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18■□□□□ 0.47
UBL4AP11441 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
UBL4AP11441 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18■□□□□ 0.47
UBL4AP11441 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18■□□□□ 0.47
UBL4AP11441 AP003097.1-201ENST00000530657 1135 ntBASIC18■□□□□ 0.47
UBL4AP11441 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18■□□□□ 0.47
UBL4AP11441 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18■□□□□ 0.47
UBL4AP11441 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4AP11441 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18■□□□□ 0.47
UBL4AP11441 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18■□□□□ 0.47
UBL4AP11441 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
UBL4AP11441 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
UBL4AP11441 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBL4AP11441 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18■□□□□ 0.47
UBL4AP11441 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4AP11441 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18■□□□□ 0.47
UBL4AP11441 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms