Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 KRT17P1-201ENST00000399211 1546 ntBASIC17.1■□□□□ 0.33
UBCP0CG48 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.1■□□□□ 0.33
UBCP0CG48 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.1■□□□□ 0.33
UBCP0CG48 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.09■□□□□ 0.33
UBCP0CG48 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UBCP0CG48 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UBCP0CG48 LSM12P1-201ENST00000411836 588 ntBASIC17.09■□□□□ 0.33
UBCP0CG48 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.09■□□□□ 0.33
UBCP0CG48 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.09■□□□□ 0.33
UBCP0CG48 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.09■□□□□ 0.33
UBCP0CG48 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBCP0CG48 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.09■□□□□ 0.33
UBCP0CG48 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBCP0CG48 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBCP0CG48 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBCP0CG48 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBCP0CG48 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBCP0CG48 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBCP0CG48 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.08■□□□□ 0.32
UBCP0CG48 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 AC116351.2-201ENST00000606540 1585 ntBASIC17.08■□□□□ 0.32
UBCP0CG48 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 AC018553.1-201ENST00000616682 1458 ntBASIC17.08■□□□□ 0.32
UBCP0CG48 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
UBCP0CG48 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.08■□□□□ 0.32
UBCP0CG48 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
UBCP0CG48 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.08■□□□□ 0.32
UBCP0CG48 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
UBCP0CG48 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.08■□□□□ 0.32
UBCP0CG48 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
UBCP0CG48 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
UBCP0CG48 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
UBCP0CG48 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
UBCP0CG48 AC005082.1-201ENST00000413042 2259 ntBASIC17.08■□□□□ 0.32
UBCP0CG48 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.08■□□□□ 0.32
UBCP0CG48 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.08■□□□□ 0.32
UBCP0CG48 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBCP0CG48 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.07■□□□□ 0.32
UBCP0CG48 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBCP0CG48 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.07■□□□□ 0.32
UBCP0CG48 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.07■□□□□ 0.32
UBCP0CG48 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 AC093787.1-201ENST00000450396 207 ntBASIC17.07■□□□□ 0.32
UBCP0CG48 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 AC005181.1-201ENST00000604782 1256 ntBASIC17.07■□□□□ 0.32
UBCP0CG48 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.07■□□□□ 0.32
UBCP0CG48 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
UBCP0CG48 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.07■□□□□ 0.32
UBCP0CG48 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
UBCP0CG48 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBCP0CG48 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBCP0CG48 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms