Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
MMP2P08253 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP2P08253 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP2P08253 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 GCSHP5-201ENST00000443090 522 ntBASIC19.67■□□□□ 0.74
MMP2P08253 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP2P08253 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.67■□□□□ 0.74
MMP2P08253 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP2P08253 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.67■□□□□ 0.74
MMP2P08253 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MMP2P08253 ZNF815P-204ENST00000434898 1737 ntBASIC19.67■□□□□ 0.74
MMP2P08253 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
MMP2P08253 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MMP2P08253 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP2P08253 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP2P08253 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP2P08253 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MMP2P08253 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP2P08253 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP2P08253 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
MMP2P08253 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP2P08253 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
MMP2P08253 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MMP2P08253 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MMP2P08253 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP2P08253 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP2P08253 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
MMP2P08253 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.66■□□□□ 0.74
MMP2P08253 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
MMP2P08253 AC104417.2-201ENST00000562989 1793 ntBASIC19.65■□□□□ 0.74
MMP2P08253 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP2P08253 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
MMP2P08253 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP2P08253 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP2P08253 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MMP2P08253 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.65■□□□□ 0.74
MMP2P08253 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
MMP2P08253 AC005332.7-201ENST00000614046 2005 ntBASIC19.65■□□□□ 0.74
MMP2P08253 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MMP2P08253 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
MMP2P08253 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP2P08253 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP2P08253 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP2P08253 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MMP2P08253 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.65■□□□□ 0.74
MMP2P08253 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MMP2P08253 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MMP2P08253 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP2P08253 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP2P08253 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.64■□□□□ 0.74
MMP2P08253 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.64■□□□□ 0.74
MMP2P08253 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.64■□□□□ 0.74
MMP2P08253 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MMP2P08253 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.64■□□□□ 0.74
MMP2P08253 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
MMP2P08253 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.64■□□□□ 0.73
MMP2P08253 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.64■□□□□ 0.73
MMP2P08253 AC142381.4-202ENST00000563973 229 ntBASIC19.64■□□□□ 0.73
MMP2P08253 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.64■□□□□ 0.73
MMP2P08253 HLA-A-209ENST00000638375 975 ntBASIC19.64■□□□□ 0.73
MMP2P08253 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MMP2P08253 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.64■□□□□ 0.73
MMP2P08253 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.64■□□□□ 0.73
MMP2P08253 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MMP2P08253 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP2P08253 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MMP2P08253 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP2P08253 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.64■□□□□ 0.73
MMP2P08253 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.63■□□□□ 0.73
MMP2P08253 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 LINC01465-201ENST00000408887 1940 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms