Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP001271.2-201ENST00000624018 1556 ntBASIC21.86■■□□□ 1.09
TPM3P06753 AC009113.1-201ENST00000570267 2443 ntBASIC21.86■■□□□ 1.09
TPM3P06753 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TPM3P06753 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.86■■□□□ 1.09
TPM3P06753 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TPM3P06753 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
TPM3P06753 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
TPM3P06753 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.85■■□□□ 1.09
TPM3P06753 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.85■■□□□ 1.09
TPM3P06753 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
TPM3P06753 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TPM3P06753 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.85■■□□□ 1.09
TPM3P06753 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.85■■□□□ 1.09
TPM3P06753 KRT8P17-201ENST00000453110 1448 ntBASIC21.85■■□□□ 1.09
TPM3P06753 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TPM3P06753 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TPM3P06753 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TPM3P06753 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.84■■□□□ 1.09
TPM3P06753 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.84■■□□□ 1.09
TPM3P06753 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.84■■□□□ 1.09
TPM3P06753 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.84■■□□□ 1.09
TPM3P06753 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.84■■□□□ 1.09
TPM3P06753 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.84■■□□□ 1.09
TPM3P06753 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.84■■□□□ 1.09
TPM3P06753 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.84■■□□□ 1.09
TPM3P06753 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.84■■□□□ 1.09
TPM3P06753 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.84■■□□□ 1.09
TPM3P06753 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.84■■□□□ 1.09
TPM3P06753 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TPM3P06753 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.84■■□□□ 1.09
TPM3P06753 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TPM3P06753 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.84■■□□□ 1.09
TPM3P06753 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TPM3P06753 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TPM3P06753 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
TPM3P06753 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TPM3P06753 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TPM3P06753 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
TPM3P06753 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.83■■□□□ 1.09
TPM3P06753 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TPM3P06753 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TPM3P06753 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TPM3P06753 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TPM3P06753 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TPM3P06753 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TPM3P06753 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.83■■□□□ 1.09
TPM3P06753 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TPM3P06753 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
TPM3P06753 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
TPM3P06753 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.83■■□□□ 1.08
TPM3P06753 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
TPM3P06753 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TPM3P06753 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TPM3P06753 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TPM3P06753 CYP21A1P-202ENST00000354927 1481 ntBASIC21.83■■□□□ 1.08
TPM3P06753 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.83■■□□□ 1.08
TPM3P06753 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TPM3P06753 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.82■■□□□ 1.08
TPM3P06753 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.82■■□□□ 1.08
TPM3P06753 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 KRT19P1-201ENST00000405746 1186 ntBASIC21.82■■□□□ 1.08
TPM3P06753 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.82■■□□□ 1.08
TPM3P06753 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.82■■□□□ 1.08
TPM3P06753 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.82■■□□□ 1.08
TPM3P06753 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.82■■□□□ 1.08
TPM3P06753 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms