Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMNAP02545 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMNAP02545 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMNAP02545 KRT16P5-201ENST00000455284 522 ntBASIC20.33■□□□□ 0.85
LMNAP02545 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.33■□□□□ 0.85
LMNAP02545 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.33■□□□□ 0.85
LMNAP02545 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.33■□□□□ 0.85
LMNAP02545 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.33■□□□□ 0.85
LMNAP02545 AC073195.1-201ENST00000607241 877 ntBASIC20.33■□□□□ 0.85
LMNAP02545 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMNAP02545 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.33■□□□□ 0.84
LMNAP02545 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.33■□□□□ 0.84
LMNAP02545 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMNAP02545 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LMNAP02545 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.32■□□□□ 0.84
LMNAP02545 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.32■□□□□ 0.84
LMNAP02545 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 NUDT16P1-203ENST00000513809 620 ntBASIC20.32■□□□□ 0.84
LMNAP02545 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.32■□□□□ 0.84
LMNAP02545 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMNAP02545 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.31■□□□□ 0.84
LMNAP02545 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LMNAP02545 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LMNAP02545 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LMNAP02545 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.31■□□□□ 0.84
LMNAP02545 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.31■□□□□ 0.84
LMNAP02545 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.31■□□□□ 0.84
LMNAP02545 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
LMNAP02545 REXO1L10P-201ENST00000615707 1290 ntBASIC20.31■□□□□ 0.84
LMNAP02545 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LMNAP02545 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.31■□□□□ 0.84
LMNAP02545 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.3■□□□□ 0.84
LMNAP02545 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.3■□□□□ 0.84
LMNAP02545 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LMNAP02545 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.3■□□□□ 0.84
LMNAP02545 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 AC006128.1-201ENST00000624704 1661 ntBASIC20.3■□□□□ 0.84
LMNAP02545 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 KRT18P56-201ENST00000507275 550 ntBASIC20.3■□□□□ 0.84
LMNAP02545 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.3■□□□□ 0.84
LMNAP02545 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.3■□□□□ 0.84
LMNAP02545 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.3■□□□□ 0.84
LMNAP02545 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.3■□□□□ 0.84
LMNAP02545 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.3■□□□□ 0.84
LMNAP02545 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LMNAP02545 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LMNAP02545 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LMNAP02545 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LMNAP02545 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNAP02545 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMNAP02545 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNAP02545 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNAP02545 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms