Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLPTM1O96005 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CLPTM1O96005 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.37■□□□□ 0.53
CLPTM1O96005 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPTM1O96005 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPTM1O96005 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPTM1O96005 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLPTM1O96005 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CLPTM1O96005 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPTM1O96005 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLPTM1O96005 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.37■□□□□ 0.53
CLPTM1O96005 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLPTM1O96005 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
CLPTM1O96005 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
CLPTM1O96005 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.36■□□□□ 0.53
CLPTM1O96005 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.36■□□□□ 0.53
CLPTM1O96005 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.36■□□□□ 0.53
CLPTM1O96005 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLPTM1O96005 AC055733.4-201ENST00000638462 1354 ntBASIC18.36■□□□□ 0.53
CLPTM1O96005 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.36■□□□□ 0.53
CLPTM1O96005 AC106820.2-201ENST00000563775 3264 ntBASIC18.36■□□□□ 0.53
CLPTM1O96005 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLPTM1O96005 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLPTM1O96005 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1O96005 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLPTM1O96005 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CLPTM1O96005 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.35■□□□□ 0.53
CLPTM1O96005 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLPTM1O96005 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLPTM1O96005 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1O96005 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1O96005 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1O96005 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.35■□□□□ 0.53
CLPTM1O96005 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLPTM1O96005 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.35■□□□□ 0.53
CLPTM1O96005 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.35■□□□□ 0.53
CLPTM1O96005 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.35■□□□□ 0.53
CLPTM1O96005 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1O96005 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1O96005 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
CLPTM1O96005 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CLPTM1O96005 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1O96005 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLPTM1O96005 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.34■□□□□ 0.53
CLPTM1O96005 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.34■□□□□ 0.53
CLPTM1O96005 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CLPTM1O96005 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLPTM1O96005 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.34■□□□□ 0.53
CLPTM1O96005 KRT18P5-201ENST00000436075 1291 ntBASIC18.34■□□□□ 0.53
CLPTM1O96005 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CLPTM1O96005 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.34■□□□□ 0.53
CLPTM1O96005 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.34■□□□□ 0.53
CLPTM1O96005 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.34■□□□□ 0.53
CLPTM1O96005 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.34■□□□□ 0.53
CLPTM1O96005 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.34■□□□□ 0.53
CLPTM1O96005 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 AC139713.2-201ENST00000641328 2723 ntBASIC18.34■□□□□ 0.53
CLPTM1O96005 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
CLPTM1O96005 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.34■□□□□ 0.53
CLPTM1O96005 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLPTM1O96005 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1O96005 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1O96005 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1O96005 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1O96005 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLPTM1O96005 AL354751.1-201ENST00000412768 1863 ntBASIC18.33■□□□□ 0.53
CLPTM1O96005 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLPTM1O96005 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms