Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.33■□□□□ 0.2
ABCA1O95477 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.33■□□□□ 0.2
ABCA1O95477 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.33■□□□□ 0.2
ABCA1O95477 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.33■□□□□ 0.2
ABCA1O95477 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ABCA1O95477 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.33■□□□□ 0.2
ABCA1O95477 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ABCA1O95477 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ABCA1O95477 MESTP1-201ENST00000404287 994 ntBASIC16.33■□□□□ 0.2
ABCA1O95477 CRYGFP-201ENST00000418459 633 ntBASIC16.33■□□□□ 0.2
ABCA1O95477 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.33■□□□□ 0.2
ABCA1O95477 KRT126P-201ENST00000549467 1181 ntBASIC16.33■□□□□ 0.2
ABCA1O95477 AP005242.2-201ENST00000580065 1175 ntBASIC16.33■□□□□ 0.2
ABCA1O95477 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCA1O95477 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ABCA1O95477 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.32■□□□□ 0.2
ABCA1O95477 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.32■□□□□ 0.2
ABCA1O95477 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ABCA1O95477 C1QL1P1-201ENST00000568105 661 ntBASIC16.32■□□□□ 0.2
ABCA1O95477 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.32■□□□□ 0.2
ABCA1O95477 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.32■□□□□ 0.2
ABCA1O95477 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ABCA1O95477 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.32■□□□□ 0.2
ABCA1O95477 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 PLK5-205ENST00000642079 1969 ntBASIC16.32■□□□□ 0.2
ABCA1O95477 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ABCA1O95477 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.32■□□□□ 0.2
ABCA1O95477 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.32■□□□□ 0.2
ABCA1O95477 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCA1O95477 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.31■□□□□ 0.2
ABCA1O95477 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.31■□□□□ 0.2
ABCA1O95477 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ABCA1O95477 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ABCA1O95477 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.31■□□□□ 0.2
ABCA1O95477 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ABCA1O95477 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.31■□□□□ 0.2
ABCA1O95477 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.31■□□□□ 0.2
ABCA1O95477 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.31■□□□□ 0.2
ABCA1O95477 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.31■□□□□ 0.2
ABCA1O95477 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 AL031133.1-201ENST00000406807 723 ntBASIC16.31■□□□□ 0.2
ABCA1O95477 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.31■□□□□ 0.2
ABCA1O95477 B3GAT3P1-201ENST00000471720 806 ntBASIC16.31■□□□□ 0.2
ABCA1O95477 KRT18P56-201ENST00000507275 550 ntBASIC16.31■□□□□ 0.2
ABCA1O95477 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.31■□□□□ 0.2
ABCA1O95477 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.31■□□□□ 0.2
ABCA1O95477 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.31■□□□□ 0.2
ABCA1O95477 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.31■□□□□ 0.2
ABCA1O95477 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.31■□□□□ 0.2
ABCA1O95477 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.31■□□□□ 0.2
ABCA1O95477 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ABCA1O95477 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ABCA1O95477 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ABCA1O95477 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.3■□□□□ 0.2
ABCA1O95477 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.3■□□□□ 0.2
ABCA1O95477 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.3■□□□□ 0.2
ABCA1O95477 YBX1P2-201ENST00000489612 999 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 DGCR10-201ENST00000609839 495 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms