Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.59■□□□□ 0.73
VAPBO95292 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.59■□□□□ 0.73
VAPBO95292 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.59■□□□□ 0.73
VAPBO95292 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.59■□□□□ 0.73
VAPBO95292 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.59■□□□□ 0.73
VAPBO95292 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VAPBO95292 AC120498.8-201ENST00000614275 531 ntBASIC19.59■□□□□ 0.73
VAPBO95292 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 BX323043.1-201ENST00000641006 1765 ntBASIC19.59■□□□□ 0.73
VAPBO95292 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.59■□□□□ 0.73
VAPBO95292 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.59■□□□□ 0.73
VAPBO95292 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VAPBO95292 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAPBO95292 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VAPBO95292 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VAPBO95292 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VAPBO95292 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
VAPBO95292 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VAPBO95292 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.58■□□□□ 0.73
VAPBO95292 AC098818.2-201ENST00000564925 2320 ntBASIC19.58■□□□□ 0.73
VAPBO95292 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.58■□□□□ 0.73
VAPBO95292 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
VAPBO95292 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VAPBO95292 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
VAPBO95292 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
VAPBO95292 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
VAPBO95292 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 AL355802.2-201ENST00000402069 882 ntBASIC19.58■□□□□ 0.72
VAPBO95292 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.58■□□□□ 0.72
VAPBO95292 HLA-L-209ENST00000420110 1011 ntBASIC19.58■□□□□ 0.72
VAPBO95292 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.58■□□□□ 0.72
VAPBO95292 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.58■□□□□ 0.72
VAPBO95292 SOX15-203ENST00000570788 1093 ntBASIC19.58■□□□□ 0.72
VAPBO95292 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.58■□□□□ 0.72
VAPBO95292 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
VAPBO95292 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.58■□□□□ 0.72
VAPBO95292 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.58■□□□□ 0.72
VAPBO95292 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.58■□□□□ 0.72
VAPBO95292 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VAPBO95292 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 AC120498.9-201ENST00000339021 3867 ntBASIC19.57■□□□□ 0.72
VAPBO95292 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.57■□□□□ 0.72
VAPBO95292 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.57■□□□□ 0.72
VAPBO95292 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.57■□□□□ 0.72
VAPBO95292 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.57■□□□□ 0.72
VAPBO95292 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.57■□□□□ 0.72
VAPBO95292 AL121906.2-201ENST00000621597 723 ntBASIC19.57■□□□□ 0.72
VAPBO95292 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.57■□□□□ 0.72
VAPBO95292 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.57■□□□□ 0.72
VAPBO95292 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.57■□□□□ 0.72
VAPBO95292 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VAPBO95292 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
VAPBO95292 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
VAPBO95292 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.56■□□□□ 0.72
VAPBO95292 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.56■□□□□ 0.72
VAPBO95292 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.56■□□□□ 0.72
VAPBO95292 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
VAPBO95292 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VAPBO95292 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.56■□□□□ 0.72
VAPBO95292 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.56■□□□□ 0.72
VAPBO95292 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
VAPBO95292 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.56■□□□□ 0.72
VAPBO95292 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.56■□□□□ 0.72
VAPBO95292 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms