Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXD2O60548 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FOXD2O60548 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXD2O60548 CRYGFP-201ENST00000418459 633 ntBASIC19.62■□□□□ 0.73
FOXD2O60548 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXD2O60548 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXD2O60548 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.62■□□□□ 0.73
FOXD2O60548 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.62■□□□□ 0.73
FOXD2O60548 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 AL121956.5-201ENST00000625261 221 ntBASIC19.62■□□□□ 0.73
FOXD2O60548 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.62■□□□□ 0.73
FOXD2O60548 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXD2O60548 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXD2O60548 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXD2O60548 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXD2O60548 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXD2O60548 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FOXD2O60548 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXD2O60548 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
FOXD2O60548 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXD2O60548 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXD2O60548 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
FOXD2O60548 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
FOXD2O60548 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXD2O60548 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FOXD2O60548 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXD2O60548 AC091390.4-202ENST00000476426 537 ntBASIC19.61■□□□□ 0.73
FOXD2O60548 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXD2O60548 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXD2O60548 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXD2O60548 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXD2O60548 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXD2O60548 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FOXD2O60548 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXD2O60548 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXD2O60548 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
FOXD2O60548 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXD2O60548 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FOXD2O60548 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FOXD2O60548 AC244015.2-201ENST00000616358 1861 ntBASIC19.6■□□□□ 0.73
FOXD2O60548 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FOXD2O60548 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
FOXD2O60548 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 HLA-G-202ENST00000376815 851 ntBASIC19.6■□□□□ 0.73
FOXD2O60548 HLA-G-203ENST00000376818 1127 ntBASIC19.6■□□□□ 0.73
FOXD2O60548 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.6■□□□□ 0.73
FOXD2O60548 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.6■□□□□ 0.73
FOXD2O60548 AL445675.2-201ENST00000620291 557 ntBASIC19.6■□□□□ 0.73
FOXD2O60548 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
FOXD2O60548 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FOXD2O60548 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXD2O60548 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXD2O60548 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 AFG3L1P-217ENST00000557444 2447 ntBASIC19.6■□□□□ 0.73
FOXD2O60548 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXD2O60548 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXD2O60548 FEM1AP4-201ENST00000443167 1987 ntBASIC19.59■□□□□ 0.73
FOXD2O60548 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXD2O60548 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
FOXD2O60548 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXD2O60548 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXD2O60548 AC117947.1-201ENST00000427448 529 ntBASIC19.59■□□□□ 0.73
FOXD2O60548 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXD2O60548 AL031432.5-201ENST00000641059 760 ntBASIC19.59■□□□□ 0.73
FOXD2O60548 AC124283.5-201ENST00000624661 1809 ntBASIC19.59■□□□□ 0.73
FOXD2O60548 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXD2O60548 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXD2O60548 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.58■□□□□ 0.73
FOXD2O60548 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.58■□□□□ 0.73
FOXD2O60548 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.58■□□□□ 0.73
FOXD2O60548 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
FOXD2O60548 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXD2O60548 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms