Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.91■□□□□ 0.14
SSSCA1O60232 KRT18P20-201ENST00000548986 1279 ntBASIC15.91■□□□□ 0.14
SSSCA1O60232 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.91■□□□□ 0.14
SSSCA1O60232 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 AC009113.1-201ENST00000570267 2443 ntBASIC15.91■□□□□ 0.14
SSSCA1O60232 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SSSCA1O60232 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.91■□□□□ 0.14
SSSCA1O60232 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSSCA1O60232 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SSSCA1O60232 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SSSCA1O60232 PTBP1P-201ENST00000554374 1601 ntBASIC15.9■□□□□ 0.14
SSSCA1O60232 AL161938.1-201ENST00000569833 2180 ntBASIC15.9■□□□□ 0.14
SSSCA1O60232 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.9■□□□□ 0.14
SSSCA1O60232 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SSSCA1O60232 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 PKD1P1-201ENST00000458669 6805 ntBASIC15.9■□□□□ 0.14
SSSCA1O60232 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SSSCA1O60232 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.9■□□□□ 0.14
SSSCA1O60232 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SSSCA1O60232 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSSCA1O60232 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SSSCA1O60232 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSSCA1O60232 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.89■□□□□ 0.13
SSSCA1O60232 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.89■□□□□ 0.13
SSSCA1O60232 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.89■□□□□ 0.13
SSSCA1O60232 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.89■□□□□ 0.13
SSSCA1O60232 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.89■□□□□ 0.13
SSSCA1O60232 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.89■□□□□ 0.13
SSSCA1O60232 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.89■□□□□ 0.13
SSSCA1O60232 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SSSCA1O60232 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.89■□□□□ 0.13
SSSCA1O60232 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSSCA1O60232 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.89■□□□□ 0.13
SSSCA1O60232 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSSCA1O60232 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.88■□□□□ 0.13
SSSCA1O60232 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.88■□□□□ 0.13
SSSCA1O60232 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.88■□□□□ 0.13
SSSCA1O60232 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
SSSCA1O60232 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SSSCA1O60232 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SSSCA1O60232 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
SSSCA1O60232 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSSCA1O60232 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SSSCA1O60232 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.88■□□□□ 0.13
SSSCA1O60232 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.88■□□□□ 0.13
SSSCA1O60232 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms