Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDELR3O43731 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDELR3O43731 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDELR3O43731 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
KDELR3O43731 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.84■□□□□ 0.77
KDELR3O43731 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.84■□□□□ 0.77
KDELR3O43731 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.84■□□□□ 0.77
KDELR3O43731 AL445675.2-201ENST00000620291 557 ntBASIC19.84■□□□□ 0.77
KDELR3O43731 AC113410.3-201ENST00000623366 203 ntBASIC19.84■□□□□ 0.77
KDELR3O43731 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.84■□□□□ 0.77
KDELR3O43731 HLA-A-209ENST00000638375 975 ntBASIC19.84■□□□□ 0.77
KDELR3O43731 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDELR3O43731 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.84■□□□□ 0.77
KDELR3O43731 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.84■□□□□ 0.77
KDELR3O43731 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.84■□□□□ 0.77
KDELR3O43731 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
KDELR3O43731 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
KDELR3O43731 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.83■□□□□ 0.77
KDELR3O43731 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.83■□□□□ 0.77
KDELR3O43731 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.83■□□□□ 0.77
KDELR3O43731 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.83■□□□□ 0.77
KDELR3O43731 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KDELR3O43731 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KDELR3O43731 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.83■□□□□ 0.77
KDELR3O43731 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KDELR3O43731 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.83■□□□□ 0.77
KDELR3O43731 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.83■□□□□ 0.76
KDELR3O43731 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KDELR3O43731 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.76
KDELR3O43731 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
KDELR3O43731 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KDELR3O43731 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
KDELR3O43731 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
KDELR3O43731 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.82■□□□□ 0.76
KDELR3O43731 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.82■□□□□ 0.76
KDELR3O43731 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
KDELR3O43731 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 CD177P1-201ENST00000606252 935 ntBASIC19.82■□□□□ 0.76
KDELR3O43731 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.82■□□□□ 0.76
KDELR3O43731 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.82■□□□□ 0.76
KDELR3O43731 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KDELR3O43731 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.82■□□□□ 0.76
KDELR3O43731 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 AFG3L1P-217ENST00000557444 2447 ntBASIC19.82■□□□□ 0.76
KDELR3O43731 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDELR3O43731 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDELR3O43731 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
KDELR3O43731 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDELR3O43731 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KDELR3O43731 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDELR3O43731 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
KDELR3O43731 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KDELR3O43731 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.81■□□□□ 0.76
KDELR3O43731 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDELR3O43731 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.81■□□□□ 0.76
KDELR3O43731 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDELR3O43731 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KDELR3O43731 FAM197Y1-201ENST00000421178 764 ntBASIC19.81■□□□□ 0.76
KDELR3O43731 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.81■□□□□ 0.76
KDELR3O43731 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.81■□□□□ 0.76
KDELR3O43731 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.81■□□□□ 0.76
KDELR3O43731 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.81■□□□□ 0.76
KDELR3O43731 CR392000.1-201ENST00000624770 1228 ntBASIC19.81■□□□□ 0.76
KDELR3O43731 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDELR3O43731 KRT16P1-201ENST00000399124 1418 ntBASIC19.81■□□□□ 0.76
KDELR3O43731 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.81■□□□□ 0.76
KDELR3O43731 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KDELR3O43731 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KDELR3O43731 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.81■□□□□ 0.76
KDELR3O43731 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDELR3O43731 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.81■□□□□ 0.76
KDELR3O43731 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
KDELR3O43731 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.8■□□□□ 0.76
KDELR3O43731 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
KDELR3O43731 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.8■□□□□ 0.76
KDELR3O43731 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.8■□□□□ 0.76
KDELR3O43731 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDELR3O43731 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDELR3O43731 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KDELR3O43731 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KDELR3O43731 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDELR3O43731 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDELR3O43731 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDELR3O43731 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
KDELR3O43731 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.8■□□□□ 0.76
KDELR3O43731 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.8■□□□□ 0.76
KDELR3O43731 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDELR3O43731 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms