Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.98■□□□□ 0.47
TO15178 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.98■□□□□ 0.47
TO15178 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TO15178 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TO15178 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.98■□□□□ 0.47
TO15178 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TO15178 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.98■□□□□ 0.47
TO15178 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.98■□□□□ 0.47
TO15178 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.98■□□□□ 0.47
TO15178 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.98■□□□□ 0.47
TO15178 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.98■□□□□ 0.47
TO15178 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.98■□□□□ 0.47
TO15178 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.98■□□□□ 0.47
TO15178 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TO15178 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.98■□□□□ 0.47
TO15178 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.98■□□□□ 0.47
TO15178 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.98■□□□□ 0.47
TO15178 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TO15178 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.98■□□□□ 0.47
TO15178 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TO15178 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TO15178 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TO15178 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.98■□□□□ 0.47
TO15178 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.98■□□□□ 0.47
TO15178 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.98■□□□□ 0.47
TO15178 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TO15178 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.97■□□□□ 0.47
TO15178 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.97■□□□□ 0.47
TO15178 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.97■□□□□ 0.47
TO15178 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TO15178 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 AL353807.1-201ENST00000427475 662 ntBASIC17.97■□□□□ 0.47
TO15178 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.97■□□□□ 0.47
TO15178 AL353708.3-201ENST00000610272 989 ntBASIC17.97■□□□□ 0.47
TO15178 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
TO15178 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.97■□□□□ 0.47
TO15178 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TO15178 AFG3L1P-217ENST00000557444 2447 ntBASIC17.97■□□□□ 0.47
TO15178 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TO15178 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TO15178 HTR7P1-201ENST00000538670 1336 ntBASIC17.97■□□□□ 0.47
TO15178 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TO15178 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.96■□□□□ 0.47
TO15178 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TO15178 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TO15178 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TO15178 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.96■□□□□ 0.47
TO15178 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TO15178 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TO15178 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.96■□□□□ 0.47
TO15178 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.96■□□□□ 0.47
TO15178 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.96■□□□□ 0.47
TO15178 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TO15178 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TO15178 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TO15178 AL135905.2-201ENST00000584934 1404 ntBASIC17.96■□□□□ 0.47
TO15178 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.96■□□□□ 0.47
TO15178 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TO15178 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
TO15178 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TO15178 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TO15178 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TO15178 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.95■□□□□ 0.46
TO15178 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TO15178 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TO15178 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TO15178 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TO15178 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TO15178 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TO15178 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.95■□□□□ 0.46
TO15178 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TO15178 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TO15178 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.95■□□□□ 0.46
TO15178 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms