Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TSPAN4O14817 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.34■□□□□ 0.21
TSPAN4O14817 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.21
TSPAN4O14817 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TSPAN4O14817 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.33■□□□□ 0.21
TSPAN4O14817 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TSPAN4O14817 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TSPAN4O14817 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TSPAN4O14817 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TSPAN4O14817 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.33■□□□□ 0.2
TSPAN4O14817 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.33■□□□□ 0.2
TSPAN4O14817 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.33■□□□□ 0.2
TSPAN4O14817 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.33■□□□□ 0.2
TSPAN4O14817 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.33■□□□□ 0.2
TSPAN4O14817 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.33■□□□□ 0.2
TSPAN4O14817 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.33■□□□□ 0.2
TSPAN4O14817 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TSPAN4O14817 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
TSPAN4O14817 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TSPAN4O14817 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 AC068418.2-201ENST00000577309 3703 ntBASIC16.33■□□□□ 0.2
TSPAN4O14817 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSPAN4O14817 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TSPAN4O14817 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TSPAN4O14817 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TSPAN4O14817 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TSPAN4O14817 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TSPAN4O14817 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
TSPAN4O14817 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.32■□□□□ 0.2
TSPAN4O14817 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.32■□□□□ 0.2
TSPAN4O14817 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TSPAN4O14817 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TSPAN4O14817 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.32■□□□□ 0.2
TSPAN4O14817 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.32■□□□□ 0.2
TSPAN4O14817 AC104564.3-201ENST00000582367 638 ntBASIC16.32■□□□□ 0.2
TSPAN4O14817 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.32■□□□□ 0.2
TSPAN4O14817 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.32■□□□□ 0.2
TSPAN4O14817 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TSPAN4O14817 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TSPAN4O14817 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSPAN4O14817 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.31■□□□□ 0.2
TSPAN4O14817 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.31■□□□□ 0.2
TSPAN4O14817 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TSPAN4O14817 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.31■□□□□ 0.2
TSPAN4O14817 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.31■□□□□ 0.2
TSPAN4O14817 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.31■□□□□ 0.2
TSPAN4O14817 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.31■□□□□ 0.2
TSPAN4O14817 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
TSPAN4O14817 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.31■□□□□ 0.2
TSPAN4O14817 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
TSPAN4O14817 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.31■□□□□ 0.2
TSPAN4O14817 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.31■□□□□ 0.2
TSPAN4O14817 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.31■□□□□ 0.2
TSPAN4O14817 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSPAN4O14817 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TSPAN4O14817 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TSPAN4O14817 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms