Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN5O00501 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLDN5O00501 LINC01465-201ENST00000408887 1940 ntBASIC20.63■□□□□ 0.89
CLDN5O00501 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN5O00501 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN5O00501 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CLDN5O00501 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN5O00501 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLDN5O00501 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN5O00501 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.63■□□□□ 0.89
CLDN5O00501 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLDN5O00501 AC125437.2-201ENST00000625180 2167 ntBASIC20.63■□□□□ 0.89
CLDN5O00501 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN5O00501 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN5O00501 KRT16P1-201ENST00000399124 1418 ntBASIC20.62■□□□□ 0.89
CLDN5O00501 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN5O00501 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.62■□□□□ 0.89
CLDN5O00501 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN5O00501 AFG3L1P-217ENST00000557444 2447 ntBASIC20.62■□□□□ 0.89
CLDN5O00501 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN5O00501 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN5O00501 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN5O00501 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.62■□□□□ 0.89
CLDN5O00501 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN5O00501 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN5O00501 AP003071.4-201ENST00000562276 1284 ntBASIC20.62■□□□□ 0.89
CLDN5O00501 MIR4785-201ENST00000585005 73 ntBASIC20.62■□□□□ 0.89
CLDN5O00501 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
CLDN5O00501 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN5O00501 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.62■□□□□ 0.89
CLDN5O00501 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN5O00501 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLDN5O00501 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CLDN5O00501 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN5O00501 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN5O00501 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN5O00501 AL355355.2-201ENST00000442321 338 ntBASIC20.61■□□□□ 0.89
CLDN5O00501 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN5O00501 AL355075.4-201ENST00000554988 638 ntBASIC20.61■□□□□ 0.89
CLDN5O00501 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN5O00501 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.61■□□□□ 0.89
CLDN5O00501 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.61■□□□□ 0.89
CLDN5O00501 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN5O00501 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN5O00501 KRT17P2-201ENST00000300992 1314 ntBASIC20.6■□□□□ 0.89
CLDN5O00501 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN5O00501 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDN5O00501 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.6■□□□□ 0.89
CLDN5O00501 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.6■□□□□ 0.89
CLDN5O00501 NUDT16P1-203ENST00000513809 620 ntBASIC20.6■□□□□ 0.89
CLDN5O00501 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.6■□□□□ 0.89
CLDN5O00501 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.6■□□□□ 0.89
CLDN5O00501 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 AL445675.2-201ENST00000620291 557 ntBASIC20.6■□□□□ 0.89
CLDN5O00501 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLDN5O00501 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN5O00501 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CLDN5O00501 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN5O00501 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN5O00501 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLDN5O00501 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CLDN5O00501 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLDN5O00501 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.59■□□□□ 0.89
CLDN5O00501 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLDN5O00501 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.59■□□□□ 0.89
CLDN5O00501 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN5O00501 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.59■□□□□ 0.89
CLDN5O00501 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.59■□□□□ 0.89
CLDN5O00501 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN5O00501 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms