Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 AC097381.1-201ENST00000429019 1296 ntBASIC21.06■□□□□ 0.96
USP27XA6NNY8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.06■□□□□ 0.96
USP27XA6NNY8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP27XA6NNY8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 AL512353.2-201ENST00000448759 1962 ntBASIC21.05■□□□□ 0.96
USP27XA6NNY8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 PHGDH-210ENST00000641115 1638 ntBASIC21.05■□□□□ 0.96
USP27XA6NNY8 AC020763.4-201ENST00000623414 4170 ntBASIC21.05■□□□□ 0.96
USP27XA6NNY8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 KRT18P20-201ENST00000548986 1279 ntBASIC21.05■□□□□ 0.96
USP27XA6NNY8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 Z98044.1-201ENST00000632503 1764 ntBASIC21.05■□□□□ 0.96
USP27XA6NNY8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP27XA6NNY8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.05■□□□□ 0.96
USP27XA6NNY8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP27XA6NNY8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.04■□□□□ 0.96
USP27XA6NNY8 KRT8P20-201ENST00000423953 1409 ntBASIC21.04■□□□□ 0.96
USP27XA6NNY8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 EDA-201ENST00000338901 1233 ntBASIC21.03■□□□□ 0.96
USP27XA6NNY8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 AC096631.2-201ENST00000436136 790 ntBASIC21.03■□□□□ 0.96
USP27XA6NNY8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 AC106739.1-201ENST00000617035 715 ntBASIC21.03■□□□□ 0.96
USP27XA6NNY8 AL136967.2-201ENST00000623968 743 ntBASIC21.03■□□□□ 0.96
USP27XA6NNY8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms