Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 CROCCP5-201ENST00000436658 830 ntBASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF4LA6NMK7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 AC004408.2-201ENST00000623613 2777 ntBASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 AL390719.1-204ENST00000412397 1219 ntBASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 RAP2CP1-201ENST00000605103 478 ntBASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CPSF4LA6NMK7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 MIR935-201ENST00000401179 91 ntBASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF4LA6NMK7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 MIPEPP3-201ENST00000412105 444 ntBASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 DUSP5P2-201ENST00000426873 1033 ntBASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 AC006970.2-201ENST00000450065 779 ntBASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPSF4LA6NMK7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms