Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01549A6NIU2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 AC018470.1-201ENST00000624790 3129 ntBASIC13.87□□□□□ -0.19
LINC01549A6NIU2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01549A6NIU2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 KRT87P-202ENST00000534226 1464 ntBASIC13.86□□□□□ -0.19
LINC01549A6NIU2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 PCDHB18P-201ENST00000524813 2368 ntBASIC13.86□□□□□ -0.19
LINC01549A6NIU2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01549A6NIU2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 AC093525.10-201ENST00000625130 1569 ntBASIC13.85□□□□□ -0.19
LINC01549A6NIU2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 KRT8P17-201ENST00000453110 1448 ntBASIC13.85□□□□□ -0.19
LINC01549A6NIU2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 CDV3P1-201ENST00000471403 739 ntBASIC13.85□□□□□ -0.19
LINC01549A6NIU2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms