Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ST7-AS1-201ENST00000456775 1889 ntBASIC24.67■■□□□ 1.54
PCDHGA6Q9Y5G7 HSD17B1P1-201ENST00000590052 955 ntBASIC24.67■■□□□ 1.54
PCDHGA6Q9Y5G7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHGA6Q9Y5G7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA6Q9Y5G7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHGA6Q9Y5G7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA6Q9Y5G7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA6Q9Y5G7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHGA6Q9Y5G7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA6Q9Y5G7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA6Q9Y5G7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDHGA6Q9Y5G7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDHGA6Q9Y5G7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGA6Q9Y5G7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGA6Q9Y5G7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGA6Q9Y5G7 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHGA6Q9Y5G7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA6Q9Y5G7 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHGA6Q9Y5G7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHGA6Q9Y5G7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHGA6Q9Y5G7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGA6Q9Y5G7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHGA6Q9Y5G7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGA6Q9Y5G7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
PCDHGA6Q9Y5G7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGA6Q9Y5G7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGA6Q9Y5G7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGA6Q9Y5G7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHGA6Q9Y5G7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHGA6Q9Y5G7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA6Q9Y5G7 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.57■■□□□ 1.52
PCDHGA6Q9Y5G7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHGA6Q9Y5G7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHGA6Q9Y5G7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.56■■□□□ 1.52
PCDHGA6Q9Y5G7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHGA6Q9Y5G7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHGA6Q9Y5G7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
PCDHGA6Q9Y5G7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA6Q9Y5G7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
PCDHGA6Q9Y5G7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA6Q9Y5G7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDHGA6Q9Y5G7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDHGA6Q9Y5G7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHGA6Q9Y5G7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA6Q9Y5G7 LINC00273-201ENST00000539813 1452 ntBASIC24.54■■□□□ 1.52
PCDHGA6Q9Y5G7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGA6Q9Y5G7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
PCDHGA6Q9Y5G7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDHGA6Q9Y5G7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDHGA6Q9Y5G7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGA6Q9Y5G7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGA6Q9Y5G7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHGA6Q9Y5G7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA6Q9Y5G7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA6Q9Y5G7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHGA6Q9Y5G7 AC010864.1-201ENST00000609407 1511 ntBASIC24.51■■□□□ 1.51
PCDHGA6Q9Y5G7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGA6Q9Y5G7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
PCDHGA6Q9Y5G7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGA6Q9Y5G7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA6Q9Y5G7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA6Q9Y5G7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGA6Q9Y5G7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PCDHGA6Q9Y5G7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA6Q9Y5G7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGA6Q9Y5G7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA6Q9Y5G7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGA6Q9Y5G7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGA6Q9Y5G7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGA6Q9Y5G7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
PCDHGA6Q9Y5G7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHGA6Q9Y5G7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGA6Q9Y5G7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGA6Q9Y5G7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.47■■□□□ 1.51
PCDHGA6Q9Y5G7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA6Q9Y5G7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHGA6Q9Y5G7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PCDHGA6Q9Y5G7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
PCDHGA6Q9Y5G7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHGA6Q9Y5G7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA6Q9Y5G7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDHGA6Q9Y5G7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHGA6Q9Y5G7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA6Q9Y5G7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA6Q9Y5G7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms