Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB9Q9Y5E1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB9Q9Y5E1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHB9Q9Y5E1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHB9Q9Y5E1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
PCDHB9Q9Y5E1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
PCDHB9Q9Y5E1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB9Q9Y5E1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHB9Q9Y5E1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHB9Q9Y5E1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB9Q9Y5E1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB9Q9Y5E1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
PCDHB9Q9Y5E1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB9Q9Y5E1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB9Q9Y5E1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHB9Q9Y5E1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB9Q9Y5E1 LINC00273-201ENST00000539813 1452 ntBASIC26.07■■□□□ 1.76
PCDHB9Q9Y5E1 AL139393.2-201ENST00000608721 2025 ntBASIC26.06■■□□□ 1.76
PCDHB9Q9Y5E1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB9Q9Y5E1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHB9Q9Y5E1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
PCDHB9Q9Y5E1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB9Q9Y5E1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHB9Q9Y5E1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.04■■□□□ 1.76
PCDHB9Q9Y5E1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHB9Q9Y5E1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHB9Q9Y5E1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.03■■□□□ 1.76
PCDHB9Q9Y5E1 AC139426.1-201ENST00000568218 2529 ntBASIC26.03■■□□□ 1.76
PCDHB9Q9Y5E1 ABCB10P3-201ENST00000561950 2166 ntBASIC26.03■■□□□ 1.76
PCDHB9Q9Y5E1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB9Q9Y5E1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHB9Q9Y5E1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.02■■□□□ 1.76
PCDHB9Q9Y5E1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB9Q9Y5E1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB9Q9Y5E1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHB9Q9Y5E1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB9Q9Y5E1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
PCDHB9Q9Y5E1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB9Q9Y5E1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB9Q9Y5E1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHB9Q9Y5E1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHB9Q9Y5E1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHB9Q9Y5E1 AC135983.2-203ENST00000454486 1613 ntBASIC26■■□□□ 1.75
PCDHB9Q9Y5E1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26■■□□□ 1.75
PCDHB9Q9Y5E1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHB9Q9Y5E1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB9Q9Y5E1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB9Q9Y5E1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
PCDHB9Q9Y5E1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.98■■□□□ 1.75
PCDHB9Q9Y5E1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.98■■□□□ 1.75
PCDHB9Q9Y5E1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB9Q9Y5E1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB9Q9Y5E1 WHAMMP2-203ENST00000563942 1603 ntBASIC25.97■■□□□ 1.75
PCDHB9Q9Y5E1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB9Q9Y5E1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB9Q9Y5E1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
PCDHB9Q9Y5E1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB9Q9Y5E1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB9Q9Y5E1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDHB9Q9Y5E1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB9Q9Y5E1 DUX4L13-201ENST00000554103 1267 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DUX4L15-201ENST00000611059 1267 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DUX4L23-201ENST00000615195 1269 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DUX4L24-201ENST00000617576 1269 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DUX4L22-201ENST00000618238 1269 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DUX4L20-201ENST00000619712 1269 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DUX4L21-201ENST00000622058 1269 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DUX4L10-201ENST00000622460 1267 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DUX4L25-201ENST00000624915 1269 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 AP004833.2-201ENST00000532228 1454 ntBASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHB9Q9Y5E1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB9Q9Y5E1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB9Q9Y5E1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB9Q9Y5E1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB9Q9Y5E1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHB9Q9Y5E1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHB9Q9Y5E1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHB9Q9Y5E1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB9Q9Y5E1 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHB9Q9Y5E1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB9Q9Y5E1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHB9Q9Y5E1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
PCDHB9Q9Y5E1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHB9Q9Y5E1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.91■■□□□ 1.74
PCDHB9Q9Y5E1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB9Q9Y5E1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.9■■□□□ 1.74
PCDHB9Q9Y5E1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDHB9Q9Y5E1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB9Q9Y5E1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB9Q9Y5E1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHB9Q9Y5E1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.89■■□□□ 1.73
PCDHB9Q9Y5E1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB9Q9Y5E1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHB9Q9Y5E1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHB9Q9Y5E1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB9Q9Y5E1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB9Q9Y5E1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.87■■□□□ 1.73
PCDHB9Q9Y5E1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHB9Q9Y5E1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms