Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 DUX4L11-201ENST00000611504 1267 ntBASIC23.39■■□□□ 1.33
RPH3AQ9Y2J0 DUX4L12-201ENST00000614593 1267 ntBASIC23.39■■□□□ 1.33
RPH3AQ9Y2J0 DUX4L14-201ENST00000621227 1267 ntBASIC23.39■■□□□ 1.33
RPH3AQ9Y2J0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RPH3AQ9Y2J0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
RPH3AQ9Y2J0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.38■■□□□ 1.33
RPH3AQ9Y2J0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.38■■□□□ 1.33
RPH3AQ9Y2J0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RPH3AQ9Y2J0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.38■■□□□ 1.33
RPH3AQ9Y2J0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RPH3AQ9Y2J0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPH3AQ9Y2J0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.37■■□□□ 1.33
RPH3AQ9Y2J0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
RPH3AQ9Y2J0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RPH3AQ9Y2J0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RPH3AQ9Y2J0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RPH3AQ9Y2J0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RPH3AQ9Y2J0 WHAMMP2-203ENST00000563942 1603 ntBASIC23.37■■□□□ 1.33
RPH3AQ9Y2J0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.36■■□□□ 1.33
RPH3AQ9Y2J0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPH3AQ9Y2J0 AC135983.2-203ENST00000454486 1613 ntBASIC23.36■■□□□ 1.33
RPH3AQ9Y2J0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
RPH3AQ9Y2J0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
RPH3AQ9Y2J0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPH3AQ9Y2J0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.33■■□□□ 1.33
RPH3AQ9Y2J0 AL139393.2-201ENST00000608721 2025 ntBASIC23.33■■□□□ 1.33
RPH3AQ9Y2J0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPH3AQ9Y2J0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.33■■□□□ 1.33
RPH3AQ9Y2J0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RPH3AQ9Y2J0 AC139426.1-201ENST00000568218 2529 ntBASIC23.32■■□□□ 1.32
RPH3AQ9Y2J0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RPH3AQ9Y2J0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.32■■□□□ 1.32
RPH3AQ9Y2J0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPH3AQ9Y2J0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
RPH3AQ9Y2J0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPH3AQ9Y2J0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RPH3AQ9Y2J0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPH3AQ9Y2J0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.29■■□□□ 1.32
RPH3AQ9Y2J0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPH3AQ9Y2J0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPH3AQ9Y2J0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.28■■□□□ 1.32
RPH3AQ9Y2J0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.28■■□□□ 1.32
RPH3AQ9Y2J0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RPH3AQ9Y2J0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L13-201ENST00000554103 1267 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 MIR4449-201ENST00000578365 66 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L15-201ENST00000611059 1267 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L23-201ENST00000615195 1269 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L24-201ENST00000617576 1269 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L22-201ENST00000618238 1269 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L20-201ENST00000619712 1269 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L21-201ENST00000622058 1269 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L10-201ENST00000622460 1267 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 DUX4L25-201ENST00000624915 1269 ntBASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPH3AQ9Y2J0 MIR3648-2-201ENST00000581792 180 ntBASIC23.26■■□□□ 1.31
RPH3AQ9Y2J0 AC016575.1-201ENST00000607026 382 ntBASIC23.26■■□□□ 1.31
RPH3AQ9Y2J0 MIR3648-1-201ENST00000615959 180 ntBASIC23.26■■□□□ 1.31
RPH3AQ9Y2J0 CR559946.2-201ENST00000623684 991 ntBASIC23.26■■□□□ 1.31
RPH3AQ9Y2J0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPH3AQ9Y2J0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RPH3AQ9Y2J0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPH3AQ9Y2J0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.25■■□□□ 1.31
RPH3AQ9Y2J0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.25■■□□□ 1.31
RPH3AQ9Y2J0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.25■■□□□ 1.31
RPH3AQ9Y2J0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.25■■□□□ 1.31
RPH3AQ9Y2J0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.25■■□□□ 1.31
RPH3AQ9Y2J0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.25■■□□□ 1.31
RPH3AQ9Y2J0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RPH3AQ9Y2J0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RPH3AQ9Y2J0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RPH3AQ9Y2J0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.24■■□□□ 1.31
RPH3AQ9Y2J0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RPH3AQ9Y2J0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RPH3AQ9Y2J0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RPH3AQ9Y2J0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.23■■□□□ 1.31
RPH3AQ9Y2J0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
RPH3AQ9Y2J0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.23■■□□□ 1.31
RPH3AQ9Y2J0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RPH3AQ9Y2J0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RPH3AQ9Y2J0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RPH3AQ9Y2J0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.22■■□□□ 1.31
RPH3AQ9Y2J0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.22■■□□□ 1.31
RPH3AQ9Y2J0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RPH3AQ9Y2J0 AP004833.2-201ENST00000532228 1454 ntBASIC23.22■■□□□ 1.31
RPH3AQ9Y2J0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPH3AQ9Y2J0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.21■■□□□ 1.31
RPH3AQ9Y2J0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.21■■□□□ 1.31
RPH3AQ9Y2J0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.21■■□□□ 1.31
RPH3AQ9Y2J0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms