Protein–RNA interactions for Protein: Q9UGL9

CRCT1, Cysteine-rich C-terminal protein 1, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRCT1Q9UGL9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CRCT1Q9UGL9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CRCT1Q9UGL9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC12.34□□□□□ -0.43
CRCT1Q9UGL9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CRCT1Q9UGL9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CRCT1Q9UGL9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC12.33□□□□□ -0.44
CRCT1Q9UGL9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CRCT1Q9UGL9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.32□□□□□ -0.44
CRCT1Q9UGL9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CRCT1Q9UGL9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC12.31□□□□□ -0.44
CRCT1Q9UGL9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CRCT1Q9UGL9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CRCT1Q9UGL9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CRCT1Q9UGL9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CRCT1Q9UGL9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC12.3□□□□□ -0.44
CRCT1Q9UGL9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CRCT1Q9UGL9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRCT1Q9UGL9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRCT1Q9UGL9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRCT1Q9UGL9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC12.29□□□□□ -0.44
CRCT1Q9UGL9 AC005837.3-201ENST00000612163 286 ntBASIC12.29□□□□□ -0.44
CRCT1Q9UGL9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.28□□□□□ -0.44
CRCT1Q9UGL9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CRCT1Q9UGL9 YBX1P4-201ENST00000392794 808 ntBASIC12.27□□□□□ -0.45
CRCT1Q9UGL9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC12.27□□□□□ -0.45
CRCT1Q9UGL9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 AC010980.1-201ENST00000587192 1142 ntBASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CRCT1Q9UGL9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CRCT1Q9UGL9 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.25□□□□□ -0.45
CRCT1Q9UGL9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CRCT1Q9UGL9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC12.24□□□□□ -0.45
CRCT1Q9UGL9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC12.24□□□□□ -0.45
CRCT1Q9UGL9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CRCT1Q9UGL9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CRCT1Q9UGL9 BHLHE23-202ENST00000612929 1109 ntBASIC12.24□□□□□ -0.45
CRCT1Q9UGL9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CRCT1Q9UGL9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CRCT1Q9UGL9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CRCT1Q9UGL9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC12.23□□□□□ -0.45
CRCT1Q9UGL9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CRCT1Q9UGL9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC12.23□□□□□ -0.45
CRCT1Q9UGL9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC12.22□□□□□ -0.45
CRCT1Q9UGL9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.22□□□□□ -0.45
CRCT1Q9UGL9 ZNRF2P3-201ENST00000424200 374 ntBASIC12.22□□□□□ -0.45
CRCT1Q9UGL9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CRCT1Q9UGL9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CRCT1Q9UGL9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC12.22□□□□□ -0.45
CRCT1Q9UGL9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC12.22□□□□□ -0.45
CRCT1Q9UGL9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CRCT1Q9UGL9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CRCT1Q9UGL9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CRCT1Q9UGL9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CRCT1Q9UGL9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CRCT1Q9UGL9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CRCT1Q9UGL9 AC103834.1-201ENST00000520383 144 ntBASIC12.21□□□□□ -0.45
CRCT1Q9UGL9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.21□□□□□ -0.45
CRCT1Q9UGL9 AC060814.1-201ENST00000554326 538 ntBASIC12.21□□□□□ -0.45
CRCT1Q9UGL9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC12.21□□□□□ -0.46
CRCT1Q9UGL9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC12.2□□□□□ -0.46
CRCT1Q9UGL9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CRCT1Q9UGL9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CRCT1Q9UGL9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC12.2□□□□□ -0.46
CRCT1Q9UGL9 AC074183.2-201ENST00000623112 922 ntBASIC12.2□□□□□ -0.46
CRCT1Q9UGL9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CRCT1Q9UGL9 AC148477.6-201ENST00000623746 465 ntBASIC12.19□□□□□ -0.46
CRCT1Q9UGL9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CRCT1Q9UGL9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CRCT1Q9UGL9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC12.18□□□□□ -0.46
CRCT1Q9UGL9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CRCT1Q9UGL9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.18□□□□□ -0.46
CRCT1Q9UGL9 AC090192.1-201ENST00000517740 490 ntBASIC12.18□□□□□ -0.46
CRCT1Q9UGL9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC12.18□□□□□ -0.46
CRCT1Q9UGL9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC12.18□□□□□ -0.46
CRCT1Q9UGL9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 AC135279.3-201ENST00000610945 1311 ntBASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CRCT1Q9UGL9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms