Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
DDX4Q9NQI0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
DDX4Q9NQI0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
DDX4Q9NQI0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.79■■■□□ 2.52
DDX4Q9NQI0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
DDX4Q9NQI0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
DDX4Q9NQI0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
DDX4Q9NQI0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
DDX4Q9NQI0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
DDX4Q9NQI0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
DDX4Q9NQI0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
DDX4Q9NQI0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.75■■■□□ 2.51
DDX4Q9NQI0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.75■■■□□ 2.51
DDX4Q9NQI0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
DDX4Q9NQI0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
DDX4Q9NQI0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.74■■■□□ 2.51
DDX4Q9NQI0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
DDX4Q9NQI0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
DDX4Q9NQI0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.73■■■□□ 2.51
DDX4Q9NQI0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
DDX4Q9NQI0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
DDX4Q9NQI0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
DDX4Q9NQI0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
DDX4Q9NQI0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
DDX4Q9NQI0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.69■■■□□ 2.5
DDX4Q9NQI0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
DDX4Q9NQI0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.68■■■□□ 2.5
DDX4Q9NQI0 GPX1-201ENST00000419349 1106 ntBASIC30.68■■■□□ 2.5
DDX4Q9NQI0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.68■■■□□ 2.5
DDX4Q9NQI0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
DDX4Q9NQI0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.67■■■□□ 2.5
DDX4Q9NQI0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
DDX4Q9NQI0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
DDX4Q9NQI0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
DDX4Q9NQI0 AC110285.7-201ENST00000624417 1536 ntBASIC30.66■■■□□ 2.5
DDX4Q9NQI0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
DDX4Q9NQI0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
DDX4Q9NQI0 ST7-AS1-201ENST00000456775 1889 ntBASIC30.64■■■□□ 2.5
DDX4Q9NQI0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
DDX4Q9NQI0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
DDX4Q9NQI0 RARRES2P2-201ENST00000394842 485 ntBASIC30.64■■■□□ 2.5
DDX4Q9NQI0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
DDX4Q9NQI0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.64■■■□□ 2.5
DDX4Q9NQI0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
DDX4Q9NQI0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.63■■■□□ 2.49
DDX4Q9NQI0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
DDX4Q9NQI0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
DDX4Q9NQI0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
DDX4Q9NQI0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.62■■■□□ 2.49
DDX4Q9NQI0 AC008813.1-201ENST00000536597 885 ntBASIC30.62■■■□□ 2.49
DDX4Q9NQI0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
DDX4Q9NQI0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.62■■■□□ 2.49
DDX4Q9NQI0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.61■■■□□ 2.49
DDX4Q9NQI0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
DDX4Q9NQI0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX4Q9NQI0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
DDX4Q9NQI0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
DDX4Q9NQI0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
DDX4Q9NQI0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
DDX4Q9NQI0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
DDX4Q9NQI0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.58■■■□□ 2.49
DDX4Q9NQI0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
DDX4Q9NQI0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.57■■■□□ 2.48
DDX4Q9NQI0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
DDX4Q9NQI0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
DDX4Q9NQI0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
DDX4Q9NQI0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
DDX4Q9NQI0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
DDX4Q9NQI0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.56■■■□□ 2.48
DDX4Q9NQI0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.55■■■□□ 2.48
DDX4Q9NQI0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
DDX4Q9NQI0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
DDX4Q9NQI0 RNF126P1-201ENST00000567452 1320 ntBASIC30.54■■■□□ 2.48
DDX4Q9NQI0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.54■■■□□ 2.48
DDX4Q9NQI0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
DDX4Q9NQI0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
DDX4Q9NQI0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
DDX4Q9NQI0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.54■■■□□ 2.48
DDX4Q9NQI0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
DDX4Q9NQI0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.53■■■□□ 2.48
DDX4Q9NQI0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
DDX4Q9NQI0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
DDX4Q9NQI0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.53■■■□□ 2.48
DDX4Q9NQI0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.53■■■□□ 2.48
DDX4Q9NQI0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.53■■■□□ 2.48
DDX4Q9NQI0 AC022413.1-201ENST00000624602 984 ntBASIC30.52■■■□□ 2.48
DDX4Q9NQI0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.52■■■□□ 2.48
DDX4Q9NQI0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
DDX4Q9NQI0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
DDX4Q9NQI0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
DDX4Q9NQI0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.51■■■□□ 2.47
DDX4Q9NQI0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.51■■■□□ 2.47
DDX4Q9NQI0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.51■■■□□ 2.47
DDX4Q9NQI0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
DDX4Q9NQI0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.5■■■□□ 2.47
DDX4Q9NQI0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.5■■■□□ 2.47
DDX4Q9NQI0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
DDX4Q9NQI0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
DDX4Q9NQI0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
DDX4Q9NQI0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms