Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC4CQ9HCJ2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.25■■□□□ 1.79
LRRC4CQ9HCJ2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC4CQ9HCJ2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LRRC4CQ9HCJ2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LRRC4CQ9HCJ2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LRRC4CQ9HCJ2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.24■■□□□ 1.79
LRRC4CQ9HCJ2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LRRC4CQ9HCJ2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC4CQ9HCJ2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC4CQ9HCJ2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC4CQ9HCJ2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC4CQ9HCJ2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRRC4CQ9HCJ2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRRC4CQ9HCJ2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.21■■□□□ 1.79
LRRC4CQ9HCJ2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRRC4CQ9HCJ2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRRC4CQ9HCJ2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
LRRC4CQ9HCJ2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC4CQ9HCJ2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.2■■□□□ 1.78
LRRC4CQ9HCJ2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC4CQ9HCJ2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC4CQ9HCJ2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC4CQ9HCJ2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRRC4CQ9HCJ2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRRC4CQ9HCJ2 AP004833.2-201ENST00000532228 1454 ntBASIC26.19■■□□□ 1.78
LRRC4CQ9HCJ2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
LRRC4CQ9HCJ2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRRC4CQ9HCJ2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
LRRC4CQ9HCJ2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.18■■□□□ 1.78
LRRC4CQ9HCJ2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.18■■□□□ 1.78
LRRC4CQ9HCJ2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.18■■□□□ 1.78
LRRC4CQ9HCJ2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.18■■□□□ 1.78
LRRC4CQ9HCJ2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.17■■□□□ 1.78
LRRC4CQ9HCJ2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LRRC4CQ9HCJ2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LRRC4CQ9HCJ2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 SETD8P1-201ENST00000623146 1180 ntBASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.16■■□□□ 1.78
LRRC4CQ9HCJ2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.15■■□□□ 1.78
LRRC4CQ9HCJ2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LRRC4CQ9HCJ2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
LRRC4CQ9HCJ2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
LRRC4CQ9HCJ2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LRRC4CQ9HCJ2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.15■■□□□ 1.78
LRRC4CQ9HCJ2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.15■■□□□ 1.78
LRRC4CQ9HCJ2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.14■■□□□ 1.78
LRRC4CQ9HCJ2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LRRC4CQ9HCJ2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LRRC4CQ9HCJ2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
LRRC4CQ9HCJ2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LRRC4CQ9HCJ2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LRRC4CQ9HCJ2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LRRC4CQ9HCJ2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
LRRC4CQ9HCJ2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
LRRC4CQ9HCJ2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.12■■□□□ 1.77
LRRC4CQ9HCJ2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LRRC4CQ9HCJ2 AL449106.1-201ENST00000608517 1980 ntBASIC26.11■■□□□ 1.77
LRRC4CQ9HCJ2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.11■■□□□ 1.77
LRRC4CQ9HCJ2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LRRC4CQ9HCJ2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LRRC4CQ9HCJ2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
LRRC4CQ9HCJ2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.1■■□□□ 1.77
LRRC4CQ9HCJ2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LRRC4CQ9HCJ2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
LRRC4CQ9HCJ2 AC127502.1-201ENST00000399971 1502 ntBASIC26.09■■□□□ 1.77
LRRC4CQ9HCJ2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LRRC4CQ9HCJ2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.09■■□□□ 1.77
LRRC4CQ9HCJ2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LRRC4CQ9HCJ2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LRRC4CQ9HCJ2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LRRC4CQ9HCJ2 LINC01003-201ENST00000564834 1764 ntBASIC26.08■■□□□ 1.77
LRRC4CQ9HCJ2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.08■■□□□ 1.77
LRRC4CQ9HCJ2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LRRC4CQ9HCJ2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.08■■□□□ 1.77
LRRC4CQ9HCJ2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
LRRC4CQ9HCJ2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
LRRC4CQ9HCJ2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LRRC4CQ9HCJ2 SUZ12P1-203ENST00000578195 985 ntBASIC26.07■■□□□ 1.76
LRRC4CQ9HCJ2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LRRC4CQ9HCJ2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.07■■□□□ 1.76
LRRC4CQ9HCJ2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
LRRC4CQ9HCJ2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
LRRC4CQ9HCJ2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.06■■□□□ 1.76
LRRC4CQ9HCJ2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LRRC4CQ9HCJ2 AC136428.2-201ENST00000563187 214 ntBASIC26.06■■□□□ 1.76
LRRC4CQ9HCJ2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
LRRC4CQ9HCJ2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.04■■□□□ 1.76
LRRC4CQ9HCJ2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.03■■□□□ 1.76
LRRC4CQ9HCJ2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LRRC4CQ9HCJ2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LRRC4CQ9HCJ2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms