Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPNE5Q9HCH3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
CPNE5Q9HCH3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CPNE5Q9HCH3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CPNE5Q9HCH3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CPNE5Q9HCH3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CPNE5Q9HCH3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.68■■□□□ 1.54
CPNE5Q9HCH3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.68■■□□□ 1.54
CPNE5Q9HCH3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CPNE5Q9HCH3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPNE5Q9HCH3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CPNE5Q9HCH3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
CPNE5Q9HCH3 AC012354.3-201ENST00000623734 483 ntBASIC24.67■■□□□ 1.54
CPNE5Q9HCH3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CPNE5Q9HCH3 NTF6A-201ENST00000591175 560 ntBASIC24.66■■□□□ 1.54
CPNE5Q9HCH3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CPNE5Q9HCH3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CPNE5Q9HCH3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.65■■□□□ 1.54
CPNE5Q9HCH3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CPNE5Q9HCH3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
CPNE5Q9HCH3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.63■■□□□ 1.53
CPNE5Q9HCH3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CPNE5Q9HCH3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CPNE5Q9HCH3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.62■■□□□ 1.53
CPNE5Q9HCH3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.62■■□□□ 1.53
CPNE5Q9HCH3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.62■■□□□ 1.53
CPNE5Q9HCH3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CPNE5Q9HCH3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE5Q9HCH3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE5Q9HCH3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE5Q9HCH3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CPNE5Q9HCH3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPNE5Q9HCH3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPNE5Q9HCH3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPNE5Q9HCH3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CPNE5Q9HCH3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPNE5Q9HCH3 AC022413.1-201ENST00000624602 984 ntBASIC24.57■■□□□ 1.52
CPNE5Q9HCH3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPNE5Q9HCH3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CPNE5Q9HCH3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CPNE5Q9HCH3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.55■■□□□ 1.52
CPNE5Q9HCH3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE5Q9HCH3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE5Q9HCH3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPNE5Q9HCH3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.54■■□□□ 1.52
CPNE5Q9HCH3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CPNE5Q9HCH3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.54■■□□□ 1.52
CPNE5Q9HCH3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPNE5Q9HCH3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CPNE5Q9HCH3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CPNE5Q9HCH3 AL033527.3-201ENST00000566366 1196 ntBASIC24.53■■□□□ 1.52
CPNE5Q9HCH3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CPNE5Q9HCH3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE5Q9HCH3 AC008813.1-201ENST00000536597 885 ntBASIC24.51■■□□□ 1.51
CPNE5Q9HCH3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE5Q9HCH3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CPNE5Q9HCH3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.5■■□□□ 1.51
CPNE5Q9HCH3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CPNE5Q9HCH3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
CPNE5Q9HCH3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE5Q9HCH3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE5Q9HCH3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE5Q9HCH3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CPNE5Q9HCH3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE5Q9HCH3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CPNE5Q9HCH3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.49■■□□□ 1.51
CPNE5Q9HCH3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CPNE5Q9HCH3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE5Q9HCH3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE5Q9HCH3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE5Q9HCH3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE5Q9HCH3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE5Q9HCH3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
CPNE5Q9HCH3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE5Q9HCH3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE5Q9HCH3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.47■■□□□ 1.51
CPNE5Q9HCH3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.47■■□□□ 1.51
CPNE5Q9HCH3 AC018358.1-201ENST00000631079 1402 ntBASIC24.47■■□□□ 1.51
CPNE5Q9HCH3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPNE5Q9HCH3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CPNE5Q9HCH3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CPNE5Q9HCH3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE5Q9HCH3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.46■■□□□ 1.51
CPNE5Q9HCH3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE5Q9HCH3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.44■■□□□ 1.5
CPNE5Q9HCH3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.44■■□□□ 1.5
CPNE5Q9HCH3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE5Q9HCH3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CPNE5Q9HCH3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.42■■□□□ 1.5
CPNE5Q9HCH3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CPNE5Q9HCH3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPNE5Q9HCH3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.41■■□□□ 1.5
CPNE5Q9HCH3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CPNE5Q9HCH3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.4■■□□□ 1.5
CPNE5Q9HCH3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.4■■□□□ 1.5
CPNE5Q9HCH3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.4■■□□□ 1.5
CPNE5Q9HCH3 LINC00273-201ENST00000539813 1452 ntBASIC24.39■■□□□ 1.5
CPNE5Q9HCH3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPNE5Q9HCH3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CPNE5Q9HCH3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms