Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.11■■■□□ 2.73
CRAMP1Q96RY5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CRAMP1Q96RY5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CRAMP1Q96RY5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CRAMP1Q96RY5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
CRAMP1Q96RY5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CRAMP1Q96RY5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
CRAMP1Q96RY5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CRAMP1Q96RY5 NTF6A-201ENST00000591175 560 ntBASIC32.08■■■□□ 2.73
CRAMP1Q96RY5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.08■■■□□ 2.73
CRAMP1Q96RY5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.07■■■□□ 2.72
CRAMP1Q96RY5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
CRAMP1Q96RY5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.05■■■□□ 2.72
CRAMP1Q96RY5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.05■■■□□ 2.72
CRAMP1Q96RY5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
CRAMP1Q96RY5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CRAMP1Q96RY5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.04■■■□□ 2.72
CRAMP1Q96RY5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.03■■■□□ 2.72
CRAMP1Q96RY5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CRAMP1Q96RY5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
CRAMP1Q96RY5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
CRAMP1Q96RY5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
CRAMP1Q96RY5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CRAMP1Q96RY5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CRAMP1Q96RY5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CRAMP1Q96RY5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CRAMP1Q96RY5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32■■■□□ 2.71
CRAMP1Q96RY5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
CRAMP1Q96RY5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
CRAMP1Q96RY5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CRAMP1Q96RY5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CRAMP1Q96RY5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CRAMP1Q96RY5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.98■■■□□ 2.71
CRAMP1Q96RY5 AC110285.7-201ENST00000624417 1536 ntBASIC31.97■■■□□ 2.71
CRAMP1Q96RY5 AC012354.3-201ENST00000623734 483 ntBASIC31.97■■■□□ 2.71
CRAMP1Q96RY5 AC148477.6-201ENST00000623746 465 ntBASIC31.97■■■□□ 2.71
CRAMP1Q96RY5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CRAMP1Q96RY5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CRAMP1Q96RY5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CRAMP1Q96RY5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CRAMP1Q96RY5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
CRAMP1Q96RY5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CRAMP1Q96RY5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CRAMP1Q96RY5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
CRAMP1Q96RY5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.92■■■□□ 2.7
CRAMP1Q96RY5 AL135925.1-201ENST00000605920 1701 ntBASIC31.92■■■□□ 2.7
CRAMP1Q96RY5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CRAMP1Q96RY5 AC060814.1-201ENST00000554326 538 ntBASIC31.91■■■□□ 2.7
CRAMP1Q96RY5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CRAMP1Q96RY5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
CRAMP1Q96RY5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.9■■■□□ 2.7
CRAMP1Q96RY5 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CRAMP1Q96RY5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.89■■■□□ 2.7
CRAMP1Q96RY5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.88■■■□□ 2.69
CRAMP1Q96RY5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CRAMP1Q96RY5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CRAMP1Q96RY5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CRAMP1Q96RY5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CRAMP1Q96RY5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.86■■■□□ 2.69
CRAMP1Q96RY5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CRAMP1Q96RY5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.85■■■□□ 2.69
CRAMP1Q96RY5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
CRAMP1Q96RY5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CRAMP1Q96RY5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
CRAMP1Q96RY5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
CRAMP1Q96RY5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CRAMP1Q96RY5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CRAMP1Q96RY5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.82■■■□□ 2.68
CRAMP1Q96RY5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CRAMP1Q96RY5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
CRAMP1Q96RY5 U85056.1-201ENST00000616429 682 ntBASIC31.82■■■□□ 2.68
CRAMP1Q96RY5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CRAMP1Q96RY5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CRAMP1Q96RY5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.8■■■□□ 2.68
CRAMP1Q96RY5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CRAMP1Q96RY5 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CRAMP1Q96RY5 MIR219A2-201ENST00000608502 1504 ntBASIC31.8■■■□□ 2.68
CRAMP1Q96RY5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CRAMP1Q96RY5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CRAMP1Q96RY5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.78■■■□□ 2.68
CRAMP1Q96RY5 AC018358.1-201ENST00000631079 1402 ntBASIC31.78■■■□□ 2.68
CRAMP1Q96RY5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CRAMP1Q96RY5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.78■■■□□ 2.68
CRAMP1Q96RY5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.78■■■□□ 2.68
CRAMP1Q96RY5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.77■■■□□ 2.68
CRAMP1Q96RY5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CRAMP1Q96RY5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
CRAMP1Q96RY5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CRAMP1Q96RY5 AC092296.2-201ENST00000589470 999 ntBASIC31.76■■■□□ 2.67
CRAMP1Q96RY5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CRAMP1Q96RY5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CRAMP1Q96RY5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.75■■■□□ 2.67
CRAMP1Q96RY5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CRAMP1Q96RY5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CRAMP1Q96RY5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CRAMP1Q96RY5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CRAMP1Q96RY5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
CRAMP1Q96RY5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CRAMP1Q96RY5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.74■■■□□ 2.67
CRAMP1Q96RY5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 340 ms