Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00052Q96N35 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00052Q96N35 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00052Q96N35 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LINC00052Q96N35 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00052Q96N35 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00052Q96N35 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00052Q96N35 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00052Q96N35 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00052Q96N35 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00052Q96N35 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00052Q96N35 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LINC00052Q96N35 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC00052Q96N35 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00052Q96N35 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21■□□□□ 0.95
LINC00052Q96N35 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00052Q96N35 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LINC00052Q96N35 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00052Q96N35 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00052Q96N35 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00052Q96N35 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00052Q96N35 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.99■□□□□ 0.95
LINC00052Q96N35 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00052Q96N35 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00052Q96N35 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LINC00052Q96N35 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC00052Q96N35 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LINC00052Q96N35 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.98■□□□□ 0.95
LINC00052Q96N35 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.98■□□□□ 0.95
LINC00052Q96N35 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00052Q96N35 DYNLL1-208ENST00000550178 581 ntBASIC20.98■□□□□ 0.95
LINC00052Q96N35 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00052Q96N35 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LINC00052Q96N35 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00052Q96N35 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00052Q96N35 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LINC00052Q96N35 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
LINC00052Q96N35 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC00052Q96N35 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00052Q96N35 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00052Q96N35 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00052Q96N35 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
LINC00052Q96N35 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00052Q96N35 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00052Q96N35 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00052Q96N35 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00052Q96N35 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.95■□□□□ 0.94
LINC00052Q96N35 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00052Q96N35 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.95■□□□□ 0.94
LINC00052Q96N35 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00052Q96N35 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LINC00052Q96N35 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00052Q96N35 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00052Q96N35 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00052Q96N35 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00052Q96N35 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00052Q96N35 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LINC00052Q96N35 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00052Q96N35 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LINC00052Q96N35 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00052Q96N35 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.92■□□□□ 0.94
LINC00052Q96N35 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC00052Q96N35 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00052Q96N35 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00052Q96N35 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC00052Q96N35 AC133561.1-201ENST00000568600 2415 ntBASIC20.92■□□□□ 0.94
LINC00052Q96N35 AL139393.2-201ENST00000608721 2025 ntBASIC20.91■□□□□ 0.94
LINC00052Q96N35 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.91■□□□□ 0.94
LINC00052Q96N35 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00052Q96N35 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LINC00052Q96N35 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00052Q96N35 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00052Q96N35 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.94
LINC00052Q96N35 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00052Q96N35 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00052Q96N35 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
LINC00052Q96N35 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00052Q96N35 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.89■□□□□ 0.93
LINC00052Q96N35 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.89■□□□□ 0.93
LINC00052Q96N35 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00052Q96N35 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00052Q96N35 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LINC00052Q96N35 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.88■□□□□ 0.93
LINC00052Q96N35 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00052Q96N35 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00052Q96N35 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00052Q96N35 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00052Q96N35 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LINC00052Q96N35 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00052Q96N35 AC091060.1-201ENST00000623524 1766 ntBASIC20.87■□□□□ 0.93
LINC00052Q96N35 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00052Q96N35 AP002365.1-201ENST00000603448 772 ntBASIC20.87■□□□□ 0.93
LINC00052Q96N35 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
LINC00052Q96N35 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00052Q96N35 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC00052Q96N35 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00052Q96N35 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
LINC00052Q96N35 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00052Q96N35 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.85■□□□□ 0.93
LINC00052Q96N35 BX255925.1-201ENST00000566954 1854 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms