Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.34■□□□□ 0.69
KCNS1Q96KK3 AL133380.1-201ENST00000506013 324 ntBASIC19.34■□□□□ 0.69
KCNS1Q96KK3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
KCNS1Q96KK3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNS1Q96KK3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KCNS1Q96KK3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.33■□□□□ 0.69
KCNS1Q96KK3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNS1Q96KK3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNS1Q96KK3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNS1Q96KK3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNS1Q96KK3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNS1Q96KK3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNS1Q96KK3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
KCNS1Q96KK3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNS1Q96KK3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KCNS1Q96KK3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNS1Q96KK3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNS1Q96KK3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
KCNS1Q96KK3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNS1Q96KK3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KCNS1Q96KK3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KCNS1Q96KK3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.29■□□□□ 0.68
KCNS1Q96KK3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KCNS1Q96KK3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNS1Q96KK3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNS1Q96KK3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
KCNS1Q96KK3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.28■□□□□ 0.68
KCNS1Q96KK3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNS1Q96KK3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNS1Q96KK3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNS1Q96KK3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNS1Q96KK3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNS1Q96KK3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNS1Q96KK3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNS1Q96KK3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNS1Q96KK3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNS1Q96KK3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNS1Q96KK3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
KCNS1Q96KK3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNS1Q96KK3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNS1Q96KK3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
KCNS1Q96KK3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
KCNS1Q96KK3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNS1Q96KK3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNS1Q96KK3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNS1Q96KK3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNS1Q96KK3 AL139393.2-201ENST00000608721 2025 ntBASIC19.22■□□□□ 0.67
KCNS1Q96KK3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNS1Q96KK3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNS1Q96KK3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNS1Q96KK3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNS1Q96KK3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNS1Q96KK3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KCNS1Q96KK3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNS1Q96KK3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNS1Q96KK3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNS1Q96KK3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNS1Q96KK3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNS1Q96KK3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNS1Q96KK3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNS1Q96KK3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KCNS1Q96KK3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.18■□□□□ 0.66
KCNS1Q96KK3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNS1Q96KK3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNS1Q96KK3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.18■□□□□ 0.66
KCNS1Q96KK3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KCNS1Q96KK3 AC010864.1-201ENST00000609407 1511 ntBASIC19.18■□□□□ 0.66
KCNS1Q96KK3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNS1Q96KK3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNS1Q96KK3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
KCNS1Q96KK3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNS1Q96KK3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNS1Q96KK3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNS1Q96KK3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNS1Q96KK3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNS1Q96KK3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNS1Q96KK3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.16■□□□□ 0.66
KCNS1Q96KK3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNS1Q96KK3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNS1Q96KK3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KCNS1Q96KK3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNS1Q96KK3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNS1Q96KK3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
KCNS1Q96KK3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNS1Q96KK3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KCNS1Q96KK3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
KCNS1Q96KK3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KCNS1Q96KK3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KCNS1Q96KK3 RARRES2P7-201ENST00000567349 469 ntBASIC19.14■□□□□ 0.65
KCNS1Q96KK3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
KCNS1Q96KK3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNS1Q96KK3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms