Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC005837.3-201ENST00000612163 286 ntBASIC10.98□□□□□ -0.65
SYNE2Q8WXH0 WASH5P-204ENST00000632292 975 ntBASIC10.98□□□□□ -0.65
SYNE2Q8WXH0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC10.98□□□□□ -0.65
SYNE2Q8WXH0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC10.98□□□□□ -0.65
SYNE2Q8WXH0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SYNE2Q8WXH0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SYNE2Q8WXH0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC10.97□□□□□ -0.65
SYNE2Q8WXH0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC10.97□□□□□ -0.65
SYNE2Q8WXH0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SYNE2Q8WXH0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC10.97□□□□□ -0.65
SYNE2Q8WXH0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
SYNE2Q8WXH0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SYNE2Q8WXH0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SYNE2Q8WXH0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SYNE2Q8WXH0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC10.96□□□□□ -0.66
SYNE2Q8WXH0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SYNE2Q8WXH0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SYNE2Q8WXH0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC10.95□□□□□ -0.66
SYNE2Q8WXH0 ESRRAP2-201ENST00000418437 1549 ntBASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SYNE2Q8WXH0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC10.93□□□□□ -0.66
SYNE2Q8WXH0 DUX4L18-201ENST00000553347 1267 ntBASIC10.93□□□□□ -0.66
SYNE2Q8WXH0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC10.93□□□□□ -0.66
SYNE2Q8WXH0 AC060814.1-201ENST00000554326 538 ntBASIC10.93□□□□□ -0.66
SYNE2Q8WXH0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC10.93□□□□□ -0.66
SYNE2Q8WXH0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC10.93□□□□□ -0.66
SYNE2Q8WXH0 ZNRF2P3-201ENST00000424200 374 ntBASIC10.93□□□□□ -0.66
SYNE2Q8WXH0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SYNE2Q8WXH0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC10.92□□□□□ -0.66
SYNE2Q8WXH0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SYNE2Q8WXH0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SYNE2Q8WXH0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SYNE2Q8WXH0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 AC090192.1-201ENST00000517740 490 ntBASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 BHLHE23-202ENST00000612929 1109 ntBASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SYNE2Q8WXH0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SYNE2Q8WXH0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC10.9□□□□□ -0.66
SYNE2Q8WXH0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC10.9□□□□□ -0.66
SYNE2Q8WXH0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC10.9□□□□□ -0.66
SYNE2Q8WXH0 AC026271.2-201ENST00000428091 497 ntBASIC10.9□□□□□ -0.66
SYNE2Q8WXH0 MIR5787-201ENST00000611784 55 ntBASIC10.89□□□□□ -0.67
SYNE2Q8WXH0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SYNE2Q8WXH0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SYNE2Q8WXH0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SYNE2Q8WXH0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC10.88□□□□□ -0.67
SYNE2Q8WXH0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
SYNE2Q8WXH0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC10.88□□□□□ -0.67
SYNE2Q8WXH0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SYNE2Q8WXH0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC10.88□□□□□ -0.67
SYNE2Q8WXH0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SYNE2Q8WXH0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC10.87□□□□□ -0.67
SYNE2Q8WXH0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC10.87□□□□□ -0.67
SYNE2Q8WXH0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SYNE2Q8WXH0 AC010980.1-201ENST00000587192 1142 ntBASIC10.87□□□□□ -0.67
SYNE2Q8WXH0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC10.86□□□□□ -0.67
SYNE2Q8WXH0 AC239859.2-201ENST00000444165 318 ntBASIC10.86□□□□□ -0.67
SYNE2Q8WXH0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SYNE2Q8WXH0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC10.86□□□□□ -0.67
SYNE2Q8WXH0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SYNE2Q8WXH0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SYNE2Q8WXH0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC10.85□□□□□ -0.67
SYNE2Q8WXH0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SYNE2Q8WXH0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC10.85□□□□□ -0.67
SYNE2Q8WXH0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SYNE2Q8WXH0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC10.85□□□□□ -0.67
SYNE2Q8WXH0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SYNE2Q8WXH0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC10.85□□□□□ -0.67
SYNE2Q8WXH0 AL592293.1-201ENST00000502889 1188 ntBASIC10.85□□□□□ -0.67
SYNE2Q8WXH0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC10.84□□□□□ -0.67
SYNE2Q8WXH0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC10.84□□□□□ -0.67
SYNE2Q8WXH0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SYNE2Q8WXH0 AC103834.1-201ENST00000520383 144 ntBASIC10.84□□□□□ -0.67
SYNE2Q8WXH0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SYNE2Q8WXH0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SYNE2Q8WXH0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC10.84□□□□□ -0.67
SYNE2Q8WXH0 AC135279.3-201ENST00000610945 1311 ntBASIC10.83□□□□□ -0.68
SYNE2Q8WXH0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYNE2Q8WXH0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC10.83□□□□□ -0.68
SYNE2Q8WXH0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SYNE2Q8WXH0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC10.83□□□□□ -0.68
SYNE2Q8WXH0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SYNE2Q8WXH0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC10.82□□□□□ -0.68
SYNE2Q8WXH0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms