Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSMEM1Q8WWF3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSMEM1Q8WWF3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.08■□□□□ 0.97
SSMEM1Q8WWF3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SSMEM1Q8WWF3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.07■□□□□ 0.96
SSMEM1Q8WWF3 CR559946.2-201ENST00000623684 991 ntBASIC21.06■□□□□ 0.96
SSMEM1Q8WWF3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.05■□□□□ 0.96
SSMEM1Q8WWF3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SSMEM1Q8WWF3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.05■□□□□ 0.96
SSMEM1Q8WWF3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.04■□□□□ 0.96
SSMEM1Q8WWF3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
SSMEM1Q8WWF3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.04■□□□□ 0.96
SSMEM1Q8WWF3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.04■□□□□ 0.96
SSMEM1Q8WWF3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
SSMEM1Q8WWF3 AL135925.1-201ENST00000605920 1701 ntBASIC21.04■□□□□ 0.96
SSMEM1Q8WWF3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSMEM1Q8WWF3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSMEM1Q8WWF3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSMEM1Q8WWF3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSMEM1Q8WWF3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSMEM1Q8WWF3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
SSMEM1Q8WWF3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L13-201ENST00000554103 1267 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L15-201ENST00000611059 1267 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L23-201ENST00000615195 1269 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L24-201ENST00000617576 1269 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L22-201ENST00000618238 1269 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L20-201ENST00000619712 1269 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L21-201ENST00000622058 1269 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L10-201ENST00000622460 1267 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 DUX4L25-201ENST00000624915 1269 ntBASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSMEM1Q8WWF3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSMEM1Q8WWF3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SSMEM1Q8WWF3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSMEM1Q8WWF3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21■□□□□ 0.95
SSMEM1Q8WWF3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSMEM1Q8WWF3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.99■□□□□ 0.95
SSMEM1Q8WWF3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSMEM1Q8WWF3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SSMEM1Q8WWF3 AC010864.1-201ENST00000609407 1511 ntBASIC20.99■□□□□ 0.95
SSMEM1Q8WWF3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SSMEM1Q8WWF3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSMEM1Q8WWF3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSMEM1Q8WWF3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSMEM1Q8WWF3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.97■□□□□ 0.95
SSMEM1Q8WWF3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SSMEM1Q8WWF3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSMEM1Q8WWF3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.97■□□□□ 0.95
SSMEM1Q8WWF3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.97■□□□□ 0.95
SSMEM1Q8WWF3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSMEM1Q8WWF3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSMEM1Q8WWF3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSMEM1Q8WWF3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSMEM1Q8WWF3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SSMEM1Q8WWF3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSMEM1Q8WWF3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSMEM1Q8WWF3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSMEM1Q8WWF3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSMEM1Q8WWF3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSMEM1Q8WWF3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSMEM1Q8WWF3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSMEM1Q8WWF3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SSMEM1Q8WWF3 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.94■□□□□ 0.94
SSMEM1Q8WWF3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.94■□□□□ 0.94
SSMEM1Q8WWF3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SSMEM1Q8WWF3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.93■□□□□ 0.94
SSMEM1Q8WWF3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSMEM1Q8WWF3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSMEM1Q8WWF3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSMEM1Q8WWF3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSMEM1Q8WWF3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSMEM1Q8WWF3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSMEM1Q8WWF3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSMEM1Q8WWF3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSMEM1Q8WWF3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSMEM1Q8WWF3 LINC00273-201ENST00000539813 1452 ntBASIC20.91■□□□□ 0.94
SSMEM1Q8WWF3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.91■□□□□ 0.94
SSMEM1Q8WWF3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSMEM1Q8WWF3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSMEM1Q8WWF3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSMEM1Q8WWF3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.9■□□□□ 0.94
SSMEM1Q8WWF3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms