Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCHCR1Q8TD31 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCHCR1Q8TD31 AC135731.1-201ENST00000569415 2548 ntBASIC26.56■■□□□ 1.84
CCHCR1Q8TD31 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCHCR1Q8TD31 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.54■■□□□ 1.84
CCHCR1Q8TD31 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.54■■□□□ 1.84
CCHCR1Q8TD31 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.53■■□□□ 1.84
CCHCR1Q8TD31 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.53■■□□□ 1.84
CCHCR1Q8TD31 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCHCR1Q8TD31 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCHCR1Q8TD31 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCHCR1Q8TD31 AL121749.1-202ENST00000609313 2153 ntBASIC26.51■■□□□ 1.84
CCHCR1Q8TD31 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 BX255925.1-201ENST00000566954 1854 ntBASIC26.51■■□□□ 1.83
CCHCR1Q8TD31 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCHCR1Q8TD31 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCHCR1Q8TD31 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCHCR1Q8TD31 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCHCR1Q8TD31 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCHCR1Q8TD31 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCHCR1Q8TD31 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCHCR1Q8TD31 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCHCR1Q8TD31 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCHCR1Q8TD31 RPS2P35-201ENST00000443417 897 ntBASIC26.47■■□□□ 1.83
CCHCR1Q8TD31 AC127502.1-201ENST00000399971 1502 ntBASIC26.47■■□□□ 1.83
CCHCR1Q8TD31 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
CCHCR1Q8TD31 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCHCR1Q8TD31 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCHCR1Q8TD31 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.46■■□□□ 1.83
CCHCR1Q8TD31 AC087741.3-201ENST00000624270 1347 ntBASIC26.45■■□□□ 1.83
CCHCR1Q8TD31 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.45■■□□□ 1.82
CCHCR1Q8TD31 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCHCR1Q8TD31 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CCHCR1Q8TD31 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CCHCR1Q8TD31 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCHCR1Q8TD31 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCHCR1Q8TD31 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCHCR1Q8TD31 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCHCR1Q8TD31 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCHCR1Q8TD31 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCHCR1Q8TD31 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCHCR1Q8TD31 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CCHCR1Q8TD31 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.42■■□□□ 1.82
CCHCR1Q8TD31 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.42■■□□□ 1.82
CCHCR1Q8TD31 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
CCHCR1Q8TD31 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCHCR1Q8TD31 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.42■■□□□ 1.82
CCHCR1Q8TD31 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CCHCR1Q8TD31 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCHCR1Q8TD31 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
CCHCR1Q8TD31 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.41■■□□□ 1.82
CCHCR1Q8TD31 AC044849.2-201ENST00000606596 710 ntBASIC26.41■■□□□ 1.82
CCHCR1Q8TD31 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCHCR1Q8TD31 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCHCR1Q8TD31 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
CCHCR1Q8TD31 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.4■■□□□ 1.82
CCHCR1Q8TD31 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CCHCR1Q8TD31 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCHCR1Q8TD31 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCHCR1Q8TD31 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.39■■□□□ 1.82
CCHCR1Q8TD31 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCHCR1Q8TD31 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCHCR1Q8TD31 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
CCHCR1Q8TD31 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCHCR1Q8TD31 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCHCR1Q8TD31 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCHCR1Q8TD31 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCHCR1Q8TD31 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.37■■□□□ 1.81
CCHCR1Q8TD31 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCHCR1Q8TD31 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCHCR1Q8TD31 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCHCR1Q8TD31 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
CCHCR1Q8TD31 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCHCR1Q8TD31 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCHCR1Q8TD31 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.35■■□□□ 1.81
CCHCR1Q8TD31 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCHCR1Q8TD31 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CCHCR1Q8TD31 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.34■■□□□ 1.81
CCHCR1Q8TD31 AC108673.1-201ENST00000510422 1159 ntBASIC26.34■■□□□ 1.81
CCHCR1Q8TD31 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.34■■□□□ 1.81
CCHCR1Q8TD31 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCHCR1Q8TD31 LINC01003-201ENST00000564834 1764 ntBASIC26.33■■□□□ 1.81
CCHCR1Q8TD31 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms