Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.69■■■□□ 2.5
NKX2-3Q8TAU0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NKX2-3Q8TAU0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
NKX2-3Q8TAU0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NKX2-3Q8TAU0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NKX2-3Q8TAU0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NKX2-3Q8TAU0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
NKX2-3Q8TAU0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NKX2-3Q8TAU0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NKX2-3Q8TAU0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.66■■■□□ 2.5
NKX2-3Q8TAU0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NKX2-3Q8TAU0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NKX2-3Q8TAU0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
NKX2-3Q8TAU0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
NKX2-3Q8TAU0 ABCB10P3-201ENST00000561950 2166 ntBASIC30.65■■■□□ 2.5
NKX2-3Q8TAU0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
NKX2-3Q8TAU0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NKX2-3Q8TAU0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
NKX2-3Q8TAU0 AL139393.2-201ENST00000608721 2025 ntBASIC30.64■■■□□ 2.5
NKX2-3Q8TAU0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NKX2-3Q8TAU0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.63■■■□□ 2.49
NKX2-3Q8TAU0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.63■■■□□ 2.49
NKX2-3Q8TAU0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
NKX2-3Q8TAU0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.61■■■□□ 2.49
NKX2-3Q8TAU0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
NKX2-3Q8TAU0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.6■■■□□ 2.49
NKX2-3Q8TAU0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
NKX2-3Q8TAU0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.59■■■□□ 2.49
NKX2-3Q8TAU0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.59■■■□□ 2.49
NKX2-3Q8TAU0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NKX2-3Q8TAU0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
NKX2-3Q8TAU0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
NKX2-3Q8TAU0 WHAMMP2-203ENST00000563942 1603 ntBASIC30.58■■■□□ 2.49
NKX2-3Q8TAU0 LINC00273-201ENST00000539813 1452 ntBASIC30.57■■■□□ 2.48
NKX2-3Q8TAU0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.57■■■□□ 2.48
NKX2-3Q8TAU0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NKX2-3Q8TAU0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.56■■■□□ 2.48
NKX2-3Q8TAU0 AC135983.2-203ENST00000454486 1613 ntBASIC30.55■■■□□ 2.48
NKX2-3Q8TAU0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.55■■■□□ 2.48
NKX2-3Q8TAU0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.54■■■□□ 2.48
NKX2-3Q8TAU0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NKX2-3Q8TAU0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
NKX2-3Q8TAU0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NKX2-3Q8TAU0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.53■■■□□ 2.48
NKX2-3Q8TAU0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.53■■■□□ 2.48
NKX2-3Q8TAU0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.53■■■□□ 2.48
NKX2-3Q8TAU0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NKX2-3Q8TAU0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.52■■■□□ 2.48
NKX2-3Q8TAU0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
NKX2-3Q8TAU0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
NKX2-3Q8TAU0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
NKX2-3Q8TAU0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
NKX2-3Q8TAU0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NKX2-3Q8TAU0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NKX2-3Q8TAU0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.49■■■□□ 2.47
NKX2-3Q8TAU0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NKX2-3Q8TAU0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
NKX2-3Q8TAU0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
NKX2-3Q8TAU0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
NKX2-3Q8TAU0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.46■■■□□ 2.47
NKX2-3Q8TAU0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NKX2-3Q8TAU0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NKX2-3Q8TAU0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.46■■■□□ 2.47
NKX2-3Q8TAU0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
NKX2-3Q8TAU0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
NKX2-3Q8TAU0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
NKX2-3Q8TAU0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NKX2-3Q8TAU0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NKX2-3Q8TAU0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.43■■■□□ 2.46
NKX2-3Q8TAU0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
NKX2-3Q8TAU0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.42■■■□□ 2.46
NKX2-3Q8TAU0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NKX2-3Q8TAU0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.42■■■□□ 2.46
NKX2-3Q8TAU0 ABHD17AP5-201ENST00000580133 923 ntBASIC30.42■■■□□ 2.46
NKX2-3Q8TAU0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.42■■■□□ 2.46
NKX2-3Q8TAU0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NKX2-3Q8TAU0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.42■■■□□ 2.46
NKX2-3Q8TAU0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.42■■■□□ 2.46
NKX2-3Q8TAU0 RARRES2P2-201ENST00000394842 485 ntBASIC30.41■■■□□ 2.46
NKX2-3Q8TAU0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.41■■■□□ 2.46
NKX2-3Q8TAU0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
NKX2-3Q8TAU0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NKX2-3Q8TAU0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
NKX2-3Q8TAU0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.4■■■□□ 2.46
NKX2-3Q8TAU0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
NKX2-3Q8TAU0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NKX2-3Q8TAU0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.4■■■□□ 2.46
NKX2-3Q8TAU0 AC100797.4-201ENST00000631653 1827 ntBASIC30.39■■■□□ 2.46
NKX2-3Q8TAU0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.39■■■□□ 2.46
NKX2-3Q8TAU0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NKX2-3Q8TAU0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NKX2-3Q8TAU0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.39■■■□□ 2.46
NKX2-3Q8TAU0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NKX2-3Q8TAU0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NKX2-3Q8TAU0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NKX2-3Q8TAU0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NKX2-3Q8TAU0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.36■■■□□ 2.45
NKX2-3Q8TAU0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NKX2-3Q8TAU0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NKX2-3Q8TAU0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms