Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
KRT78Q8N1N4 AC135983.2-203ENST00000454486 1613 ntBASIC24.68■■□□□ 1.54
KRT78Q8N1N4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
KRT78Q8N1N4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.68■■□□□ 1.54
KRT78Q8N1N4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
KRT78Q8N1N4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
KRT78Q8N1N4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
KRT78Q8N1N4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT78Q8N1N4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT78Q8N1N4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
KRT78Q8N1N4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
KRT78Q8N1N4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT78Q8N1N4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.67■■□□□ 1.54
KRT78Q8N1N4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT78Q8N1N4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
KRT78Q8N1N4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT78Q8N1N4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT78Q8N1N4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
KRT78Q8N1N4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.66■■□□□ 1.54
KRT78Q8N1N4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT78Q8N1N4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT78Q8N1N4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
KRT78Q8N1N4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
KRT78Q8N1N4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.65■■□□□ 1.54
KRT78Q8N1N4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
KRT78Q8N1N4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT78Q8N1N4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.64■■□□□ 1.54
KRT78Q8N1N4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.64■■□□□ 1.54
KRT78Q8N1N4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.64■■□□□ 1.54
KRT78Q8N1N4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
KRT78Q8N1N4 AC021231.2-201ENST00000594613 730 ntBASIC24.64■■□□□ 1.54
KRT78Q8N1N4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT78Q8N1N4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KRT78Q8N1N4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT78Q8N1N4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KRT78Q8N1N4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.63■■□□□ 1.53
KRT78Q8N1N4 DRD5P2-201ENST00000421395 2012 ntBASIC24.62■■□□□ 1.53
KRT78Q8N1N4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT78Q8N1N4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT78Q8N1N4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.62■■□□□ 1.53
KRT78Q8N1N4 WHAMMP2-203ENST00000563942 1603 ntBASIC24.62■■□□□ 1.53
KRT78Q8N1N4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KRT78Q8N1N4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
KRT78Q8N1N4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KRT78Q8N1N4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KRT78Q8N1N4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
KRT78Q8N1N4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT78Q8N1N4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
KRT78Q8N1N4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
KRT78Q8N1N4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
KRT78Q8N1N4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT78Q8N1N4 AC100797.4-201ENST00000631653 1827 ntBASIC24.61■■□□□ 1.53
KRT78Q8N1N4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT78Q8N1N4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT78Q8N1N4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT78Q8N1N4 AC142086.6-201ENST00000621154 1765 ntBASIC24.59■■□□□ 1.53
KRT78Q8N1N4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.59■■□□□ 1.53
KRT78Q8N1N4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
KRT78Q8N1N4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT78Q8N1N4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.58■■□□□ 1.53
KRT78Q8N1N4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT78Q8N1N4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT78Q8N1N4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT78Q8N1N4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT78Q8N1N4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
KRT78Q8N1N4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.57■■□□□ 1.52
KRT78Q8N1N4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.57■■□□□ 1.52
KRT78Q8N1N4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.57■■□□□ 1.52
KRT78Q8N1N4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.57■■□□□ 1.52
KRT78Q8N1N4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.57■■□□□ 1.52
KRT78Q8N1N4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
KRT78Q8N1N4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
KRT78Q8N1N4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.55■■□□□ 1.52
KRT78Q8N1N4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
KRT78Q8N1N4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
KRT78Q8N1N4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.55■■□□□ 1.52
KRT78Q8N1N4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
KRT78Q8N1N4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.54■■□□□ 1.52
KRT78Q8N1N4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT78Q8N1N4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT78Q8N1N4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.54■■□□□ 1.52
KRT78Q8N1N4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KRT78Q8N1N4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.53■■□□□ 1.52
KRT78Q8N1N4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
KRT78Q8N1N4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.52■■□□□ 1.52
KRT78Q8N1N4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.52■■□□□ 1.52
KRT78Q8N1N4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
KRT78Q8N1N4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.51■■□□□ 1.51
KRT78Q8N1N4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
KRT78Q8N1N4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
KRT78Q8N1N4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
KRT78Q8N1N4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
KRT78Q8N1N4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
KRT78Q8N1N4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
KRT78Q8N1N4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
KRT78Q8N1N4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.5■■□□□ 1.51
KRT78Q8N1N4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
KRT78Q8N1N4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KRT78Q8N1N4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
KRT78Q8N1N4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms