Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SIX5Q8N196 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
SIX5Q8N196 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.53■■□□□ 1.84
SIX5Q8N196 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SIX5Q8N196 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SIX5Q8N196 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SIX5Q8N196 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
SIX5Q8N196 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.52■■□□□ 1.84
SIX5Q8N196 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.52■■□□□ 1.84
SIX5Q8N196 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SIX5Q8N196 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SIX5Q8N196 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SIX5Q8N196 AC060814.1-201ENST00000554326 538 ntBASIC26.51■■□□□ 1.83
SIX5Q8N196 AL161658.1-201ENST00000623641 1967 ntBASIC26.51■■□□□ 1.83
SIX5Q8N196 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.5■■□□□ 1.83
SIX5Q8N196 AC010864.1-201ENST00000609407 1511 ntBASIC26.5■■□□□ 1.83
SIX5Q8N196 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.5■■□□□ 1.83
SIX5Q8N196 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SIX5Q8N196 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SIX5Q8N196 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SIX5Q8N196 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SIX5Q8N196 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SIX5Q8N196 AC004987.1-201ENST00000428627 508 ntBASIC26.49■■□□□ 1.83
SIX5Q8N196 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.49■■□□□ 1.83
SIX5Q8N196 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SIX5Q8N196 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SIX5Q8N196 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SIX5Q8N196 KRT18P60-201ENST00000312876 1297 ntBASIC26.48■■□□□ 1.83
SIX5Q8N196 RARRES2P1-201ENST00000474487 481 ntBASIC26.48■■□□□ 1.83
SIX5Q8N196 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.48■■□□□ 1.83
SIX5Q8N196 ATP5G2P3-201ENST00000429083 425 ntBASIC26.47■■□□□ 1.83
SIX5Q8N196 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SIX5Q8N196 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SIX5Q8N196 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SIX5Q8N196 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
SIX5Q8N196 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.46■■□□□ 1.83
SIX5Q8N196 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SIX5Q8N196 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SIX5Q8N196 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SIX5Q8N196 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SIX5Q8N196 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.44■■□□□ 1.82
SIX5Q8N196 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.44■■□□□ 1.82
SIX5Q8N196 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SIX5Q8N196 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SIX5Q8N196 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SIX5Q8N196 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SIX5Q8N196 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.42■■□□□ 1.82
SIX5Q8N196 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.42■■□□□ 1.82
SIX5Q8N196 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SIX5Q8N196 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SIX5Q8N196 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.41■■□□□ 1.82
SIX5Q8N196 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.41■■□□□ 1.82
SIX5Q8N196 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.41■■□□□ 1.82
SIX5Q8N196 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SIX5Q8N196 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SIX5Q8N196 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SIX5Q8N196 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SIX5Q8N196 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
SIX5Q8N196 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SIX5Q8N196 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SIX5Q8N196 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SIX5Q8N196 WHAMMP2-203ENST00000563942 1603 ntBASIC26.39■■□□□ 1.81
SIX5Q8N196 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SIX5Q8N196 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
SIX5Q8N196 AC148477.6-201ENST00000623746 465 ntBASIC26.38■■□□□ 1.81
SIX5Q8N196 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SIX5Q8N196 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SIX5Q8N196 AC110285.7-201ENST00000624417 1536 ntBASIC26.36■■□□□ 1.81
SIX5Q8N196 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SIX5Q8N196 AC135983.2-203ENST00000454486 1613 ntBASIC26.36■■□□□ 1.81
SIX5Q8N196 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.35■■□□□ 1.81
SIX5Q8N196 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.35■■□□□ 1.81
SIX5Q8N196 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SIX5Q8N196 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
SIX5Q8N196 AC092296.2-201ENST00000589470 999 ntBASIC26.34■■□□□ 1.81
SIX5Q8N196 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SIX5Q8N196 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SIX5Q8N196 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SIX5Q8N196 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
SIX5Q8N196 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SIX5Q8N196 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SIX5Q8N196 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SIX5Q8N196 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.32■■□□□ 1.8
SIX5Q8N196 AC127502.1-201ENST00000399971 1502 ntBASIC26.32■■□□□ 1.8
SIX5Q8N196 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SIX5Q8N196 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SIX5Q8N196 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
SIX5Q8N196 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SIX5Q8N196 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SIX5Q8N196 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.29■■□□□ 1.8
SIX5Q8N196 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.29■■□□□ 1.8
SIX5Q8N196 MIR219A2-201ENST00000608502 1504 ntBASIC26.29■■□□□ 1.8
SIX5Q8N196 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SIX5Q8N196 ECEL1P2-201ENST00000461596 1295 ntBASIC26.28■■□□□ 1.8
SIX5Q8N196 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SIX5Q8N196 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SIX5Q8N196 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SIX5Q8N196 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SIX5Q8N196 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.27■■□□□ 1.8
SIX5Q8N196 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms