Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.54■■□□□ 1.2
RTTNQ86VV8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.54■■□□□ 1.2
RTTNQ86VV8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RTTNQ86VV8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTTNQ86VV8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RTTNQ86VV8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.54■■□□□ 1.2
RTTNQ86VV8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
RTTNQ86VV8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTTNQ86VV8 AC127502.1-201ENST00000399971 1502 ntBASIC22.53■■□□□ 1.2
RTTNQ86VV8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RTTNQ86VV8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.52■■□□□ 1.2
RTTNQ86VV8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTTNQ86VV8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTTNQ86VV8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RTTNQ86VV8 ZNRF2P2-203ENST00000454624 420 ntBASIC22.51■■□□□ 1.19
RTTNQ86VV8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTTNQ86VV8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTTNQ86VV8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RTTNQ86VV8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.5■■□□□ 1.19
RTTNQ86VV8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.5■■□□□ 1.19
RTTNQ86VV8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTTNQ86VV8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTTNQ86VV8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RTTNQ86VV8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTTNQ86VV8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RTTNQ86VV8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.48■■□□□ 1.19
RTTNQ86VV8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTTNQ86VV8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.48■■□□□ 1.19
RTTNQ86VV8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTTNQ86VV8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RTTNQ86VV8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.47■■□□□ 1.19
RTTNQ86VV8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTTNQ86VV8 AC135983.2-203ENST00000454486 1613 ntBASIC22.47■■□□□ 1.19
RTTNQ86VV8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTTNQ86VV8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTTNQ86VV8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
RTTNQ86VV8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RTTNQ86VV8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTTNQ86VV8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RTTNQ86VV8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTTNQ86VV8 LINC00273-201ENST00000539813 1452 ntBASIC22.45■■□□□ 1.18
RTTNQ86VV8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RTTNQ86VV8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RTTNQ86VV8 DRD5P2-201ENST00000421395 2012 ntBASIC22.44■■□□□ 1.18
RTTNQ86VV8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.43■■□□□ 1.18
RTTNQ86VV8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTTNQ86VV8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTTNQ86VV8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.42■■□□□ 1.18
RTTNQ86VV8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.42■■□□□ 1.18
RTTNQ86VV8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.42■■□□□ 1.18
RTTNQ86VV8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTTNQ86VV8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTTNQ86VV8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.41■■□□□ 1.18
RTTNQ86VV8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTTNQ86VV8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
RTTNQ86VV8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.4■■□□□ 1.18
RTTNQ86VV8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.4■■□□□ 1.18
RTTNQ86VV8 AC021231.2-201ENST00000594613 730 ntBASIC22.39■■□□□ 1.18
RTTNQ86VV8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RTTNQ86VV8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.39■■□□□ 1.17
RTTNQ86VV8 AC100797.4-201ENST00000631653 1827 ntBASIC22.39■■□□□ 1.17
RTTNQ86VV8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
RTTNQ86VV8 WHAMMP2-203ENST00000563942 1603 ntBASIC22.39■■□□□ 1.17
RTTNQ86VV8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTTNQ86VV8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTTNQ86VV8 MIR639-201ENST00000384974 98 ntBASIC22.38■■□□□ 1.17
RTTNQ86VV8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.38■■□□□ 1.17
RTTNQ86VV8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.38■■□□□ 1.17
RTTNQ86VV8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTTNQ86VV8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RTTNQ86VV8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.38■■□□□ 1.17
RTTNQ86VV8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTTNQ86VV8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTTNQ86VV8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.37■■□□□ 1.17
RTTNQ86VV8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTTNQ86VV8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.37■■□□□ 1.17
RTTNQ86VV8 DUX4L29-201ENST00000425409 679 ntBASIC22.37■■□□□ 1.17
RTTNQ86VV8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTTNQ86VV8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTTNQ86VV8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTTNQ86VV8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTTNQ86VV8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTTNQ86VV8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
RTTNQ86VV8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RTTNQ86VV8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTTNQ86VV8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTTNQ86VV8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTTNQ86VV8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTTNQ86VV8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTTNQ86VV8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RTTNQ86VV8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTTNQ86VV8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.33■■□□□ 1.17
RTTNQ86VV8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RTTNQ86VV8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RTTNQ86VV8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTTNQ86VV8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTTNQ86VV8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.31■■□□□ 1.16
RTTNQ86VV8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTTNQ86VV8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTTNQ86VV8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms