Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.49■□□□□ 0.71
CDPF1Q6NVV7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDPF1Q6NVV7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDPF1Q6NVV7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDPF1Q6NVV7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.47■□□□□ 0.71
CDPF1Q6NVV7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDPF1Q6NVV7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDPF1Q6NVV7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDPF1Q6NVV7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDPF1Q6NVV7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDPF1Q6NVV7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CDPF1Q6NVV7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDPF1Q6NVV7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDPF1Q6NVV7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDPF1Q6NVV7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDPF1Q6NVV7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDPF1Q6NVV7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.43■□□□□ 0.7
CDPF1Q6NVV7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDPF1Q6NVV7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDPF1Q6NVV7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDPF1Q6NVV7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDPF1Q6NVV7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.39■□□□□ 0.69
CDPF1Q6NVV7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.39■□□□□ 0.69
CDPF1Q6NVV7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.37■□□□□ 0.69
CDPF1Q6NVV7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDPF1Q6NVV7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDPF1Q6NVV7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.37■□□□□ 0.69
CDPF1Q6NVV7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDPF1Q6NVV7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDPF1Q6NVV7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDPF1Q6NVV7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDPF1Q6NVV7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDPF1Q6NVV7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDPF1Q6NVV7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.34■□□□□ 0.69
CDPF1Q6NVV7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDPF1Q6NVV7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDPF1Q6NVV7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDPF1Q6NVV7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDPF1Q6NVV7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDPF1Q6NVV7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDPF1Q6NVV7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 LINC00543-201ENST00000567234 1845 ntBASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDPF1Q6NVV7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDPF1Q6NVV7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
CDPF1Q6NVV7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDPF1Q6NVV7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.28■□□□□ 0.68
CDPF1Q6NVV7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms