Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NIPAL1Q6NVV3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.54■■□□□ 1.52
NIPAL1Q6NVV3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
NIPAL1Q6NVV3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NIPAL1Q6NVV3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
NIPAL1Q6NVV3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.53■■□□□ 1.52
NIPAL1Q6NVV3 AP004833.2-201ENST00000532228 1454 ntBASIC24.52■■□□□ 1.52
NIPAL1Q6NVV3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
NIPAL1Q6NVV3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NIPAL1Q6NVV3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.51■■□□□ 1.51
NIPAL1Q6NVV3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NIPAL1Q6NVV3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.51■■□□□ 1.51
NIPAL1Q6NVV3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NIPAL1Q6NVV3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
NIPAL1Q6NVV3 ZNRF2P2-203ENST00000454624 420 ntBASIC24.5■■□□□ 1.51
NIPAL1Q6NVV3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NIPAL1Q6NVV3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NIPAL1Q6NVV3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.49■■□□□ 1.51
NIPAL1Q6NVV3 LINC01971-201ENST00000617888 1048 ntBASIC24.49■■□□□ 1.51
NIPAL1Q6NVV3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NIPAL1Q6NVV3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.49■■□□□ 1.51
NIPAL1Q6NVV3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
NIPAL1Q6NVV3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NIPAL1Q6NVV3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NIPAL1Q6NVV3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.48■■□□□ 1.51
NIPAL1Q6NVV3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
NIPAL1Q6NVV3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NIPAL1Q6NVV3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
NIPAL1Q6NVV3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.46■■□□□ 1.51
NIPAL1Q6NVV3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NIPAL1Q6NVV3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.46■■□□□ 1.51
NIPAL1Q6NVV3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
NIPAL1Q6NVV3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NIPAL1Q6NVV3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NIPAL1Q6NVV3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
NIPAL1Q6NVV3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.44■■□□□ 1.5
NIPAL1Q6NVV3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
NIPAL1Q6NVV3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
NIPAL1Q6NVV3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NIPAL1Q6NVV3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
NIPAL1Q6NVV3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.43■■□□□ 1.5
NIPAL1Q6NVV3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NIPAL1Q6NVV3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NIPAL1Q6NVV3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.43■■□□□ 1.5
NIPAL1Q6NVV3 AC135983.2-203ENST00000454486 1613 ntBASIC24.42■■□□□ 1.5
NIPAL1Q6NVV3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NIPAL1Q6NVV3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NIPAL1Q6NVV3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
NIPAL1Q6NVV3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NIPAL1Q6NVV3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NIPAL1Q6NVV3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NIPAL1Q6NVV3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NIPAL1Q6NVV3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NIPAL1Q6NVV3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NIPAL1Q6NVV3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NIPAL1Q6NVV3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NIPAL1Q6NVV3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NIPAL1Q6NVV3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.39■■□□□ 1.49
NIPAL1Q6NVV3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NIPAL1Q6NVV3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.38■■□□□ 1.49
NIPAL1Q6NVV3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.37■■□□□ 1.49
NIPAL1Q6NVV3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.36■■□□□ 1.49
NIPAL1Q6NVV3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NIPAL1Q6NVV3 MIR7108-201ENST00000614319 87 ntBASIC24.36■■□□□ 1.49
NIPAL1Q6NVV3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
NIPAL1Q6NVV3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
NIPAL1Q6NVV3 AL139393.2-201ENST00000608721 2025 ntBASIC24.35■■□□□ 1.49
NIPAL1Q6NVV3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
NIPAL1Q6NVV3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.35■■□□□ 1.49
NIPAL1Q6NVV3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NIPAL1Q6NVV3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NIPAL1Q6NVV3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NIPAL1Q6NVV3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.34■■□□□ 1.49
NIPAL1Q6NVV3 DUX4L11-201ENST00000611504 1267 ntBASIC24.34■■□□□ 1.49
NIPAL1Q6NVV3 DUX4L12-201ENST00000614593 1267 ntBASIC24.34■■□□□ 1.49
NIPAL1Q6NVV3 DUX4L14-201ENST00000621227 1267 ntBASIC24.34■■□□□ 1.49
NIPAL1Q6NVV3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NIPAL1Q6NVV3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NIPAL1Q6NVV3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.33■■□□□ 1.49
NIPAL1Q6NVV3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
NIPAL1Q6NVV3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
NIPAL1Q6NVV3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
NIPAL1Q6NVV3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.32■■□□□ 1.48
NIPAL1Q6NVV3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
NIPAL1Q6NVV3 WHAMMP2-203ENST00000563942 1603 ntBASIC24.32■■□□□ 1.48
NIPAL1Q6NVV3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NIPAL1Q6NVV3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NIPAL1Q6NVV3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NIPAL1Q6NVV3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
NIPAL1Q6NVV3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.3■■□□□ 1.48
NIPAL1Q6NVV3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms