Protein–RNA interactions for Protein: Q5TKA1

LIN9, Protein lin-9 homolog, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9Q5TKA1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.83■■■□□ 2.05
LIN9Q5TKA1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.83■■■□□ 2.05
LIN9Q5TKA1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
LIN9Q5TKA1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
LIN9Q5TKA1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.82■■■□□ 2.04
LIN9Q5TKA1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
LIN9Q5TKA1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
LIN9Q5TKA1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LIN9Q5TKA1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
LIN9Q5TKA1 DUX4L13-201ENST00000554103 1267 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 DUX4L15-201ENST00000611059 1267 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 DUX4L23-201ENST00000615195 1269 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 DUX4L24-201ENST00000617576 1269 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 DUX4L22-201ENST00000618238 1269 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 DUX4L20-201ENST00000619712 1269 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 DUX4L21-201ENST00000622058 1269 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 DUX4L10-201ENST00000622460 1267 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 DUX4L25-201ENST00000624915 1269 ntBASIC27.8■■■□□ 2.04
LIN9Q5TKA1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.8■■■□□ 2.04
LIN9Q5TKA1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LIN9Q5TKA1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.8■■■□□ 2.04
LIN9Q5TKA1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
LIN9Q5TKA1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
LIN9Q5TKA1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.79■■■□□ 2.04
LIN9Q5TKA1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.78■■■□□ 2.04
LIN9Q5TKA1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LIN9Q5TKA1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LIN9Q5TKA1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.76■■■□□ 2.03
LIN9Q5TKA1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.76■■■□□ 2.03
LIN9Q5TKA1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
LIN9Q5TKA1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
LIN9Q5TKA1 HSD17B1P1-201ENST00000590052 955 ntBASIC27.75■■■□□ 2.03
LIN9Q5TKA1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
LIN9Q5TKA1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LIN9Q5TKA1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
LIN9Q5TKA1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LIN9Q5TKA1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
LIN9Q5TKA1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.73■■■□□ 2.03
LIN9Q5TKA1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.73■■■□□ 2.03
LIN9Q5TKA1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
LIN9Q5TKA1 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.72■■■□□ 2.03
LIN9Q5TKA1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
LIN9Q5TKA1 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.72■■■□□ 2.03
LIN9Q5TKA1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
LIN9Q5TKA1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LIN9Q5TKA1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.7■■■□□ 2.02
LIN9Q5TKA1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.7■■■□□ 2.02
LIN9Q5TKA1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
LIN9Q5TKA1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
LIN9Q5TKA1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
LIN9Q5TKA1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.67■■■□□ 2.02
LIN9Q5TKA1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
LIN9Q5TKA1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
LIN9Q5TKA1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.67■■■□□ 2.02
LIN9Q5TKA1 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.66■■■□□ 2.02
LIN9Q5TKA1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
LIN9Q5TKA1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
LIN9Q5TKA1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
LIN9Q5TKA1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LIN9Q5TKA1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LIN9Q5TKA1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LIN9Q5TKA1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.01
LIN9Q5TKA1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
LIN9Q5TKA1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.63■■■□□ 2.01
LIN9Q5TKA1 AL139393.2-201ENST00000608721 2025 ntBASIC27.62■■■□□ 2.01
LIN9Q5TKA1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
LIN9Q5TKA1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
LIN9Q5TKA1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.62■■■□□ 2.01
LIN9Q5TKA1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
LIN9Q5TKA1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
LIN9Q5TKA1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LIN9Q5TKA1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.61■■■□□ 2.01
LIN9Q5TKA1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.6■■■□□ 2.01
LIN9Q5TKA1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.6■■■□□ 2.01
LIN9Q5TKA1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.6■■■□□ 2.01
LIN9Q5TKA1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.59■■■□□ 2.01
LIN9Q5TKA1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
LIN9Q5TKA1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.59■■■□□ 2.01
LIN9Q5TKA1 LINC00273-201ENST00000539813 1452 ntBASIC27.58■■■□□ 2.01
LIN9Q5TKA1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
LIN9Q5TKA1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.58■■■□□ 2.01
LIN9Q5TKA1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.58■■■□□ 2.01
LIN9Q5TKA1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LIN9Q5TKA1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
LIN9Q5TKA1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
LIN9Q5TKA1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.56■■■□□ 2
LIN9Q5TKA1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
LIN9Q5TKA1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.55■■■□□ 2
LIN9Q5TKA1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
LIN9Q5TKA1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.54■■■□□ 2
LIN9Q5TKA1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.54■■■□□ 2
LIN9Q5TKA1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.53■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms