Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF20Q53R12 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF20Q53R12 AC021231.2-201ENST00000594613 730 ntBASIC19.73■□□□□ 0.75
TM4SF20Q53R12 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF20Q53R12 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF20Q53R12 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF20Q53R12 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF20Q53R12 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF20Q53R12 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF20Q53R12 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF20Q53R12 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.67■□□□□ 0.74
TM4SF20Q53R12 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF20Q53R12 LINC00273-201ENST00000539813 1452 ntBASIC19.67■□□□□ 0.74
TM4SF20Q53R12 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TM4SF20Q53R12 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF20Q53R12 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.66■□□□□ 0.74
TM4SF20Q53R12 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.66■□□□□ 0.74
TM4SF20Q53R12 AP004833.2-201ENST00000532228 1454 ntBASIC19.66■□□□□ 0.74
TM4SF20Q53R12 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.64■□□□□ 0.74
TM4SF20Q53R12 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 AC135983.2-203ENST00000454486 1613 ntBASIC19.63■□□□□ 0.73
TM4SF20Q53R12 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF20Q53R12 WHAMMP2-203ENST00000563942 1603 ntBASIC19.62■□□□□ 0.73
TM4SF20Q53R12 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TM4SF20Q53R12 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF20Q53R12 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF20Q53R12 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF20Q53R12 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.59■□□□□ 0.73
TM4SF20Q53R12 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.59■□□□□ 0.73
TM4SF20Q53R12 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF20Q53R12 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF20Q53R12 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF20Q53R12 AC100797.4-201ENST00000631653 1827 ntBASIC19.58■□□□□ 0.73
TM4SF20Q53R12 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF20Q53R12 ABHD17AP4-201ENST00000411545 909 ntBASIC19.58■□□□□ 0.72
TM4SF20Q53R12 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF20Q53R12 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF20Q53R12 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF20Q53R12 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF20Q53R12 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms