Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.01■■□□□ 1.59
PDX1P52945 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PDX1P52945 RARRES2P2-201ENST00000394842 485 ntBASIC25■■□□□ 1.59
PDX1P52945 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDX1P52945 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25■■□□□ 1.59
PDX1P52945 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.99■■□□□ 1.59
PDX1P52945 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDX1P52945 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDX1P52945 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDX1P52945 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDX1P52945 ABCB10P1-201ENST00000614297 2181 ntBASIC24.96■■□□□ 1.59
PDX1P52945 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PDX1P52945 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDX1P52945 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.95■■□□□ 1.58
PDX1P52945 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
PDX1P52945 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
PDX1P52945 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDX1P52945 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDX1P52945 GPX1-201ENST00000419349 1106 ntBASIC24.94■■□□□ 1.58
PDX1P52945 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
PDX1P52945 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PDX1P52945 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PDX1P52945 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PDX1P52945 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PDX1P52945 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PDX1P52945 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
PDX1P52945 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PDX1P52945 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PDX1P52945 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.9■■□□□ 1.58
PDX1P52945 ABHD17AP5-201ENST00000580133 923 ntBASIC24.89■■□□□ 1.58
PDX1P52945 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PDX1P52945 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PDX1P52945 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PDX1P52945 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDX1P52945 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDX1P52945 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
PDX1P52945 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PDX1P52945 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.87■■□□□ 1.57
PDX1P52945 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PDX1P52945 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
PDX1P52945 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.87■■□□□ 1.57
PDX1P52945 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.87■■□□□ 1.57
PDX1P52945 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PDX1P52945 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PDX1P52945 AC127502.1-201ENST00000399971 1502 ntBASIC24.86■■□□□ 1.57
PDX1P52945 RNF126P1-201ENST00000567452 1320 ntBASIC24.86■■□□□ 1.57
PDX1P52945 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDX1P52945 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
PDX1P52945 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDX1P52945 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PDX1P52945 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDX1P52945 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
PDX1P52945 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.84■■□□□ 1.57
PDX1P52945 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PDX1P52945 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PDX1P52945 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.83■■□□□ 1.57
PDX1P52945 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
PDX1P52945 WHAMMP2-203ENST00000563942 1603 ntBASIC24.83■■□□□ 1.56
PDX1P52945 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDX1P52945 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.81■■□□□ 1.56
PDX1P52945 AC135983.2-203ENST00000454486 1613 ntBASIC24.81■■□□□ 1.56
PDX1P52945 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDX1P52945 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDX1P52945 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PDX1P52945 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDX1P52945 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDX1P52945 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.8■■□□□ 1.56
PDX1P52945 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDX1P52945 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.79■■□□□ 1.56
PDX1P52945 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.79■■□□□ 1.56
PDX1P52945 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
PDX1P52945 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDX1P52945 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.78■■□□□ 1.56
PDX1P52945 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.78■■□□□ 1.56
PDX1P52945 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.77■■□□□ 1.56
PDX1P52945 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.77■■□□□ 1.56
PDX1P52945 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDX1P52945 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDX1P52945 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDX1P52945 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDX1P52945 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
PDX1P52945 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDX1P52945 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PDX1P52945 AC008813.1-201ENST00000536597 885 ntBASIC24.75■■□□□ 1.55
PDX1P52945 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDX1P52945 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDX1P52945 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
PDX1P52945 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.74■■□□□ 1.55
PDX1P52945 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
PDX1P52945 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDX1P52945 AC022413.1-201ENST00000624602 984 ntBASIC24.73■■□□□ 1.55
PDX1P52945 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDX1P52945 ST7-AS1-201ENST00000456775 1889 ntBASIC24.72■■□□□ 1.55
PDX1P52945 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PDX1P52945 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDX1P52945 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDX1P52945 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PDX1P52945 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.71■■□□□ 1.55
PDX1P52945 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDX1P52945 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms