Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 tD(GUC)L1tD(GUC)L1 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)L2tD(GUC)L2 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)MtD(GUC)M 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)OtD(GUC)O 72 nt8.58□□□□□ -1.04
PUF4P25339 IGD1YFR017C 588 nt8.58□□□□□ -1.04
PUF4P25339 FSH2YMR222C 672 nt8.58□□□□□ -1.04
PUF4P25339 DUR3YHL016C 2208 nt8.58□□□□□ -1.04
PUF4P25339 SDS24YBR214W 1584 nt8.57□□□□□ -1.04
PUF4P25339 SRM1YGL097W 1449 nt8.56□□□□□ -1.04 RIP-Chip
PUF4P25339 MDL2YPL270W 2322 nt8.56□□□□□ -1.04
PUF4P25339 YLR072WYLR072W 2082 nt8.56□□□□□ -1.04
PUF4P25339 VBA3YCL069W 1377 nt8.56□□□□□ -1.04
PUF4P25339 EMC3YKL207W 762 nt8.55□□□□□ -1.04
PUF4P25339 MRS4YKR052C 915 nt8.55□□□□□ -1.04
PUF4P25339 AAC3YBR085W 924 nt8.55□□□□□ -1.04
PUF4P25339 SAM50YNL026W 1455 nt8.55□□□□□ -1.04
PUF4P25339 MLS1YNL117W 1665 nt8.54□□□□□ -1.04
PUF4P25339 TOS1YBR162C 1368 nt8.54□□□□□ -1.04
PUF4P25339 ADE2YOR128C 1716 nt8.54□□□□□ -1.04
PUF4P25339 YHR131CYHR131C 2553 nt8.53□□□□□ -1.04
PUF4P25339 SNU66YOR308C 1764 nt8.53□□□□□ -1.04
PUF4P25339 snR86snR86 1004 nt8.52□□□□□ -1.05
PUF4P25339 YPT11YNL304W 1254 nt8.52□□□□□ -1.05
PUF4P25339 HDA1YNL021W 2121 nt8.51□□□□□ -1.05
PUF4P25339 YPL071CYPL071C 471 nt8.51□□□□□ -1.05
PUF4P25339 MIM1YOL026C 342 nt8.5□□□□□ -1.05
PUF4P25339 YOR072WYOR072W 315 nt8.5□□□□□ -1.05
PUF4P25339 tA(AGC)DtA(AGC)D 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)FtA(AGC)F 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)GtA(AGC)G 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)HtA(AGC)H 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)JtA(AGC)J 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)K1tA(AGC)K1 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)K2tA(AGC)K2 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)LtA(AGC)L 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)M1tA(AGC)M1 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)M2tA(AGC)M2 73 nt8.49□□□□□ -1.05
PUF4P25339 tA(AGC)PtA(AGC)P 73 nt8.49□□□□□ -1.05
PUF4P25339 RPL12BYDR418W 498 nt8.49□□□□□ -1.05
PUF4P25339 IDP3YNL009W 1263 nt8.49□□□□□ -1.05 RIP-Chip
PUF4P25339 TMS1YDR105C 1422 nt8.48□□□□□ -1.05
PUF4P25339 MOB1YIL106W 945 nt8.48□□□□□ -1.05
PUF4P25339 LPD1YFL018C 1500 nt8.48□□□□□ -1.05
PUF4P25339 HBS1YKR084C 1836 nt8.47□□□□□ -1.05
PUF4P25339 ABP1YCR088W 1779 nt8.46□□□□□ -1.05
PUF4P25339 MEX67YPL169C 1800 nt8.46□□□□□ -1.06
PUF4P25339 FLX1YIL134W 936 nt8.46□□□□□ -1.06
PUF4P25339 YJL211CYJL211C 444 nt8.46□□□□□ -1.06
PUF4P25339 YNL165WYNL165W 1221 nt8.46□□□□□ -1.06
PUF4P25339 ECM10YEL030W 1935 nt8.46□□□□□ -1.06
PUF4P25339 MEP1YGR121C 1479 nt8.45□□□□□ -1.06
PUF4P25339 MAM3YOL060C 2121 nt8.45□□□□□ -1.06 RIP-Chip
PUF4P25339 YFR020WYFR020W 699 nt8.44□□□□□ -1.06
PUF4P25339 YMR210WYMR210W 1350 nt8.44□□□□□ -1.06
PUF4P25339 YBR056WYBR056W 1506 nt8.44□□□□□ -1.06
PUF4P25339 YJR149WYJR149W 1215 nt8.43□□□□□ -1.06
PUF4P25339 SWP1YMR149W 861 nt8.43□□□□□ -1.06 RIP-Chip
PUF4P25339 YOR268CYOR268C 399 nt8.43□□□□□ -1.06
PUF4P25339 IPL1YPL209C 1104 nt8.43□□□□□ -1.06
PUF4P25339 LEA1YPL213W 717 nt8.43□□□□□ -1.06
PUF4P25339 ENO1YGR254W 1314 nt8.43□□□□□ -1.06
PUF4P25339 YCR025CYCR025C 411 nt8.42□□□□□ -1.06
PUF4P25339 LYS20YDL182W 1287 nt8.42□□□□□ -1.06
PUF4P25339 YJL009WYJL009W 327 nt8.42□□□□□ -1.06 RIP-Chip
PUF4P25339 EEB1YPL095C 1371 nt8.42□□□□□ -1.06
PUF4P25339 ARP10YDR106W 855 nt8.41□□□□□ -1.06
PUF4P25339 RCR1YBR005W 642 nt8.41□□□□□ -1.06
PUF4P25339 YOR343CYOR343C 327 nt8.41□□□□□ -1.06
PUF4P25339 YAL016C-AYAL016C-A 315 nt8.4□□□□□ -1.06
PUF4P25339 RSM7YJR113C 744 nt8.4□□□□□ -1.06
PUF4P25339 ORT1YOR130C 879 nt8.4□□□□□ -1.06
PUF4P25339 ADE5,7YGL234W 2409 nt8.4□□□□□ -1.07
PUF4P25339 YRF1-2YER190W 5046 nt8.4□□□□□ -1.07
PUF4P25339 MFG1YDL233W 1377 nt8.39□□□□□ -1.07
PUF4P25339 UTP6YDR449C 1323 nt8.38□□□□□ -1.07
PUF4P25339 MGM101YJR144W 810 nt8.38□□□□□ -1.07
PUF4P25339 HIS3YOR202W 663 nt8.38□□□□□ -1.07
PUF4P25339 RNA170RNA170 169 nt8.37□□□□□ -1.07
PUF4P25339 YMR007WYMR007W 381 nt8.37□□□□□ -1.07
PUF4P25339 snR4snR4 186 nt8.37□□□□□ -1.07
PUF4P25339 YLR280CYLR280C 351 nt8.36□□□□□ -1.07
PUF4P25339 BUB2YMR055C 921 nt8.36□□□□□ -1.07
PUF4P25339 HOG1YLR113W 1308 nt8.35□□□□□ -1.07
PUF4P25339 UFD1YGR048W 1086 nt8.35□□□□□ -1.07 RIP-Chip
PUF4P25339 YIR035CYIR035C 765 nt8.33□□□□□ -1.08
PUF4P25339 COX16YJL003W 357 nt8.33□□□□□ -1.08
PUF4P25339 CYC3YAL039C 810 nt8.33□□□□□ -1.08
PUF4P25339 SRP102YKL154W 735 nt8.33□□□□□ -1.08 RIP-Chip
PUF4P25339 ERO1YML130C 1692 nt8.33□□□□□ -1.08
PUF4P25339 AST1YBL069W 1290 nt8.32□□□□□ -1.08
PUF4P25339 DUS3YLR401C 2007 nt8.31□□□□□ -1.08
PUF4P25339 HRA1HRA1 564 nt8.31□□□□□ -1.08
PUF4P25339 MET22YOL064C 1074 nt8.31□□□□□ -1.08
PUF4P25339 INO1YJL153C 1602 nt8.29□□□□□ -1.08
PUF4P25339 SWM1YDR260C 513 nt8.29□□□□□ -1.08
PUF4P25339 HOS2YGL194C 1359 nt8.29□□□□□ -1.08
PUF4P25339 LRO1YNR008W 1986 nt8.29□□□□□ -1.08
PUF4P25339 TGA1tA(UGC)A 73 nt8.28□□□□□ -1.08
PUF4P25339 tA(UGC)EtA(UGC)E 73 nt8.28□□□□□ -1.08
PUF4P25339 tA(UGC)GtA(UGC)G 73 nt8.28□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 77.6 ms