RNA–Protein interactions for RNA: YOR072W

YOR072W, Transcript of Dubious open reading frame, yeast

Gene YOR072W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOR072W	YOR072W	SPA2	P23201	1466 aa	Known RBP	12.66	□□□□□ -0.38
YOR072W	YOR072W	BFR2	Q06631	534 aa	Known RBP	12.37	□□□□□ -0.43
YOR072W	YOR072W	SKI3	P17883	1432 aa	Known RBP	12.32	□□□□□ -0.44
YOR072W	YOR072W	SGS1	P35187	1447 aa		12.31	□□□□□ -0.44
YOR072W	YOR072W	SSN2	P38931	1420 aa		12.25	□□□□□ -0.45
YOR072W	YOR072W	NOP2	P40991	618 aa	Known RBP	12.2	□□□□□ -0.46
YOR072W	YOR072W	INO80	P53115	1489 aa		11.94	□□□□□ -0.5
YOR072W	YOR072W	DRS1	P32892	752 aa	Known RBP	11.92	□□□□□ -0.5
YOR072W	YOR072W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.78	□□□□□ -0.52	not detected
YOR072W	YOR072W	RQC2	Q12532	1038 aa	Known RBP	11.74	□□□□□ -0.53
YOR072W	YOR072W	CHD1	P32657	1468 aa		11.68	□□□□□ -0.54
YOR072W	YOR072W	CAB3	P36076	571 aa		11.58	□□□□□ -0.56
YOR072W	YOR072W	MMS22	Q06164	1454 aa		11.51	□□□□□ -0.57
YOR072W	YOR072W	EBP2	P36049	427 aa	Known RBP	11.5	□□□□□ -0.57
YOR072W	YOR072W	TCB3	Q03640	1545 aa	Known RBP	11.5	□□□□□ -0.57
YOR072W	YOR072W	ENP1	P38333	483 aa	Known RBP	11.4	□□□□□ -0.58
YOR072W	YOR072W	XRN1	P22147	1528 aa	Known RBP	11.39	□□□□□ -0.59
YOR072W	YOR072W	UFD4	P33202	1483 aa		11.38	□□□□□ -0.59
YOR072W	YOR072W	SPP41	P38904	1435 aa		11.28	□□□□□ -0.6
YOR072W	YOR072W	STH1	P32597	1359 aa		11.16	□□□□□ -0.62
YOR072W	YOR072W	TFA1	P36100	482 aa		11.16	□□□□□ -0.62
YOR072W	YOR072W	SEC3	P33332	1336 aa	Known RBP	11.15	□□□□□ -0.62
YOR072W	YOR072W	IKI3	Q06706	1349 aa	Known RBP	11.14	□□□□□ -0.63
YOR072W	YOR072W	TRM732	Q03496	1420 aa		11.11	□□□□□ -0.63
YOR072W	YOR072W	POL5	P39985	1022 aa	Known RBP	11.11	□□□□□ -0.63
YOR072W	YOR072W	THO2	P53552	1597 aa	Known RBP	11.11	□□□□□ -0.63
YOR072W	YOR072W	MON2	P48563	1636 aa	Predicted RBP	11.1	□□□□□ -0.63
YOR072W	YOR072W	TY1B-DR4	Q07793	1604 aa		11.09	□□□□□ -0.63
YOR072W	YOR072W	YPR148C	Q06523	435 aa		11.08	□□□□□ -0.64
YOR072W	YOR072W	ECM5	Q03214	1411 aa		11.03	□□□□□ -0.64
YOR072W	YOR072W	HSL1	P34244	1518 aa		11.03	□□□□□ -0.64
YOR072W	YOR072W	SPT6	P23615	1451 aa	Known RBP	11.02	□□□□□ -0.65
YOR072W	YOR072W	STU1	P38198	1513 aa		11.01	□□□□□ -0.65
YOR072W	YOR072W	YTA7	P40340	1379 aa		11.01	□□□□□ -0.65
YOR072W	YOR072W	NUP170	P38181	1502 aa		11	□□□□□ -0.65
YOR072W	YOR072W	MYO2	P19524	1574 aa	Known RBP	11	□□□□□ -0.65
YOR072W	YOR072W	SIN3	P22579	1536 aa		10.99	□□□□□ -0.65
YOR072W	YOR072W	SIS2	P36024	562 aa		10.98	□□□□□ -0.65
YOR072W	YOR072W	MNN4	P36044	1178 aa		10.93	□□□□□ -0.66
YOR072W	YOR072W	SSK2	P53599	1579 aa		10.93	□□□□□ -0.66
YOR072W	YOR072W	RSE1	Q04693	1361 aa	Known RBP	10.92	□□□□□ -0.66
YOR072W	YOR072W	SPT7	P35177	1332 aa		10.92	□□□□□ -0.66
YOR072W	YOR072W	TCB2	P48231	1178 aa		10.91	□□□□□ -0.66
YOR072W	YOR072W	REV3	P14284	1504 aa		10.9	□□□□□ -0.66
YOR072W	YOR072W	PRS1	P32895	427 aa	Known RBP	10.9	□□□□□ -0.66
YOR072W	YOR072W	HIR3	P47171	1648 aa		10.9	□□□□□ -0.66
YOR072W	YOR072W	MLP2	P40457	1679 aa		10.89	□□□□□ -0.67
YOR072W	YOR072W	POL1	P13382	1468 aa		10.87	□□□□□ -0.67
YOR072W	YOR072W	PEP1	P32319	1579 aa		10.86	□□□□□ -0.67
YOR072W	YOR072W	TAF2	P23255	1407 aa		10.84	□□□□□ -0.67
YOR072W	YOR072W	TAF7	Q05021	590 aa		10.84	□□□□□ -0.67
YOR072W	YOR072W	URN1	Q06525	465 aa	Known RBP	10.84	□□□□□ -0.67
YOR072W	YOR072W	SAS10	Q12136	610 aa	Predicted RBP	10.84	□□□□□ -0.67
YOR072W	YOR072W	CLC1	P17891	233 aa		10.83	□□□□□ -0.68
YOR072W	YOR072W	SMC4	Q12267	1418 aa		10.83	□□□□□ -0.68
YOR072W	YOR072W	ESP1	Q03018	1630 aa		10.82	□□□□□ -0.68
YOR072W	YOR072W	SSM4	P40318	1319 aa		10.81	□□□□□ -0.68
YOR072W	YOR072W	MYO4	P32492	1471 aa		10.78	□□□□□ -0.68
YOR072W	YOR072W	PDR10	P51533	1564 aa		10.76	□□□□□ -0.69
YOR072W	YOR072W	BUD4	P47136	1447 aa		10.75	□□□□□ -0.69
YOR072W	YOR072W	SCC2	Q04002	1493 aa		10.75	□□□□□ -0.69
YOR072W	YOR072W	IME2	P32581	645 aa		10.75	□□□□□ -0.69
YOR072W	YOR072W	PAN1	P32521	1480 aa		10.74	□□□□□ -0.69
YOR072W	YOR072W	SWR1	Q05471	1514 aa		10.73	□□□□□ -0.69
YOR072W	YOR072W	SRB8	P25648	1427 aa		10.72	□□□□□ -0.69
YOR072W	YOR072W	BPT1	P14772	1559 aa		10.72	□□□□□ -0.69
YOR072W	YOR072W	QCR6	P00127	147 aa		10.71	□□□□□ -0.69
YOR072W	YOR072W	EAF7	P53911	425 aa	Known RBP	10.69	□□□□□ -0.7
YOR072W	YOR072W	YLR419W	Q06698	1435 aa	Known RBP	10.68	□□□□□ -0.7
YOR072W	YOR072W	RTT106	P40161	455 aa		10.67	□□□□□ -0.7
YOR072W	YOR072W	IRC20	Q06554	1556 aa		10.65	□□□□□ -0.71
YOR072W	YOR072W	DNA2	P38859	1522 aa		10.63	□□□□□ -0.71
YOR072W	YOR072W	TOP2	P06786	1428 aa	Known RBP	10.62	□□□□□ -0.71
YOR072W	YOR072W	YOR1	P53049	1477 aa		10.61	□□□□□ -0.71
YOR072W	YOR072W	OPY1	P38271	328 aa		10.59	□□□□□ -0.71
YOR072W	YOR072W	SNQ2	P32568	1501 aa	Known RBP	10.58	□□□□□ -0.72
YOR072W	YOR072W	RKR1	Q04781	1562 aa		10.57	□□□□□ -0.72
YOR072W	YOR072W	YPK9	Q12697	1472 aa		10.56	□□□□□ -0.72
YOR072W	YOR072W	YFR016C	P43597	1233 aa	Known RBP	10.56	□□□□□ -0.72
YOR072W	YOR072W	RPC31	P17890	251 aa		10.55	□□□□□ -0.72
YOR072W	YOR072W	SNF7	P39929	240 aa	Known RBP	10.54	□□□□□ -0.72
YOR072W	YOR072W	TSC11	P40061	1430 aa		10.54	□□□□□ -0.72
YOR072W	YOR072W	MHP1	P43638	1398 aa		10.53	□□□□□ -0.72
YOR072W	YOR072W	CFT1	Q06632	1357 aa	Known RBP	10.53	□□□□□ -0.72
YOR072W	YOR072W	LEO1	P38439	464 aa		10.53	□□□□□ -0.72
YOR072W	YOR072W	GEA1	P47102	1408 aa	Predicted RBP	10.52	□□□□□ -0.73
YOR072W	YOR072W	RLF2	Q12495	606 aa		10.52	□□□□□ -0.73
YOR072W	YOR072W	YCF1	P39109	1515 aa	Known RBP	10.5	□□□□□ -0.73
YOR072W	YOR072W	NUP159	P40477	1460 aa		10.49	□□□□□ -0.73
YOR072W	YOR072W	KOG1	P38873	1557 aa		10.48	□□□□□ -0.73
YOR072W	YOR072W	AIM44	Q99299	758 aa		10.47	□□□□□ -0.73
YOR072W	YOR072W	PDR15	Q04182	1529 aa	Known RBP	10.47	□□□□□ -0.73
YOR072W	YOR072W	YIR014W	P40570	242 aa		10.46	□□□□□ -0.73
YOR072W	YOR072W	FPR3	P38911	411 aa	Known RBP	10.44	□□□□□ -0.74
YOR072W	YOR072W	RPS0B	P46654	252 aa	Known RBP	10.44	□□□□□ -0.74
YOR072W	YOR072W	PSD2	P53037	1138 aa	Known RBP	10.44	□□□□□ -0.74
YOR072W	YOR072W	LEU3	P08638	886 aa		10.43	□□□□□ -0.74
YOR072W	YOR072W	MMS1	Q06211	1407 aa		10.42	□□□□□ -0.74
YOR072W	YOR072W	ABP1	P15891	592 aa	Known RBP	10.42	□□□□□ -0.74
YOR072W	YOR072W	ESC1	Q03661	1658 aa	Known RBP	10.41	□□□□□ -0.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms