Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ERCC2P18074 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ERCC2P18074 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ERCC2P18074 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.48■■□□□ 1.83
ERCC2P18074 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.48■■□□□ 1.83
ERCC2P18074 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
ERCC2P18074 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ERCC2P18074 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ERCC2P18074 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ERCC2P18074 AC100797.4-201ENST00000631653 1827 ntBASIC26.46■■□□□ 1.83
ERCC2P18074 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.46■■□□□ 1.83
ERCC2P18074 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ERCC2P18074 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.46■■□□□ 1.83
ERCC2P18074 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.46■■□□□ 1.83
ERCC2P18074 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.46■■□□□ 1.83
ERCC2P18074 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ERCC2P18074 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.46■■□□□ 1.83
ERCC2P18074 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.45■■□□□ 1.83
ERCC2P18074 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.45■■□□□ 1.82
ERCC2P18074 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
ERCC2P18074 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.45■■□□□ 1.82
ERCC2P18074 DRD5P2-201ENST00000421395 2012 ntBASIC26.44■■□□□ 1.82
ERCC2P18074 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ERCC2P18074 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
ERCC2P18074 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ERCC2P18074 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ERCC2P18074 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ERCC2P18074 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.44■■□□□ 1.82
ERCC2P18074 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.44■■□□□ 1.82
ERCC2P18074 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
ERCC2P18074 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
ERCC2P18074 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ERCC2P18074 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ERCC2P18074 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ERCC2P18074 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.43■■□□□ 1.82
ERCC2P18074 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.43■■□□□ 1.82
ERCC2P18074 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ERCC2P18074 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
ERCC2P18074 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.42■■□□□ 1.82
ERCC2P18074 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
ERCC2P18074 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ERCC2P18074 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ERCC2P18074 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.42■■□□□ 1.82
ERCC2P18074 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ERCC2P18074 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
ERCC2P18074 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.41■■□□□ 1.82
ERCC2P18074 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.41■■□□□ 1.82
ERCC2P18074 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ERCC2P18074 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
ERCC2P18074 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.4■■□□□ 1.82
ERCC2P18074 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.4■■□□□ 1.82
ERCC2P18074 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.4■■□□□ 1.82
ERCC2P18074 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.4■■□□□ 1.82
ERCC2P18074 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ERCC2P18074 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ERCC2P18074 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.38■■□□□ 1.81
ERCC2P18074 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ERCC2P18074 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ERCC2P18074 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ERCC2P18074 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.37■■□□□ 1.81
ERCC2P18074 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.37■■□□□ 1.81
ERCC2P18074 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
ERCC2P18074 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.37■■□□□ 1.81
ERCC2P18074 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ERCC2P18074 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ERCC2P18074 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
ERCC2P18074 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ERCC2P18074 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ERCC2P18074 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.34■■□□□ 1.81
ERCC2P18074 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ERCC2P18074 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
ERCC2P18074 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC2P18074 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC2P18074 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC2P18074 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC2P18074 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.32■■□□□ 1.8
ERCC2P18074 AC142086.6-201ENST00000621154 1765 ntBASIC26.31■■□□□ 1.8
ERCC2P18074 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ERCC2P18074 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ERCC2P18074 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
ERCC2P18074 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC2P18074 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
ERCC2P18074 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.29■■□□□ 1.8
ERCC2P18074 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.29■■□□□ 1.8
ERCC2P18074 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.29■■□□□ 1.8
ERCC2P18074 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ERCC2P18074 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ERCC2P18074 ZNRF2P2-203ENST00000454624 420 ntBASIC26.28■■□□□ 1.8
ERCC2P18074 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.28■■□□□ 1.8
ERCC2P18074 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERCC2P18074 ABHD17AP4-201ENST00000411545 909 ntBASIC26.27■■□□□ 1.8
ERCC2P18074 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.27■■□□□ 1.8
ERCC2P18074 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.26■■□□□ 1.79
ERCC2P18074 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.26■■□□□ 1.79
ERCC2P18074 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ERCC2P18074 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ERCC2P18074 LINC01971-201ENST00000617888 1048 ntBASIC26.25■■□□□ 1.79
ERCC2P18074 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ERCC2P18074 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.24■■□□□ 1.79
ERCC2P18074 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms