Protein–RNA interactions for Protein: P0CX84

RPL35A, 60S ribosomal protein L35-A, yeastyeast

Known RBP Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL35AP0CX84 tA(UGC)GtA(UGC)G 73 nt7□□□□□ -1.29
RPL35AP0CX84 tA(UGC)LtA(UGC)L 73 nt7□□□□□ -1.29
RPL35AP0CX84 tA(UGC)OtA(UGC)O 73 nt7□□□□□ -1.29
RPL35AP0CX84 YDR467CYDR467C 327 nt7□□□□□ -1.29
RPL35AP0CX84 MET30YIL046W 1923 nt6.99□□□□□ -1.29
RPL35AP0CX84 OLA1YBR025C 1185 nt6.99□□□□□ -1.29
RPL35AP0CX84 YJL160CYJL160C 864 nt6.98□□□□□ -1.29
RPL35AP0CX84 FCY1YPR062W 477 nt6.98□□□□□ -1.29
RPL35AP0CX84 AAC3YBR085W 924 nt6.98□□□□□ -1.29
RPL35AP0CX84 FRT1YOR324C 1809 nt6.98□□□□□ -1.29
RPL35AP0CX84 MEX67YPL169C 1800 nt6.98□□□□□ -1.29
RPL35AP0CX84 TMS1YDR105C 1422 nt6.98□□□□□ -1.29
RPL35AP0CX84 LEU4YNL104C 1860 nt6.98□□□□□ -1.29
RPL35AP0CX84 tE(CUC)DtE(CUC)D 72 nt6.97□□□□□ -1.29
RPL35AP0CX84 tE(CUC)ItE(CUC)I 72 nt6.97□□□□□ -1.29
RPL35AP0CX84 YNL190WYNL190W 615 nt6.97□□□□□ -1.29
RPL35AP0CX84 YBL095WYBL095W 813 nt6.97□□□□□ -1.29
RPL35AP0CX84 LSP1YPL004C 1026 nt6.97□□□□□ -1.29
RPL35AP0CX84 BAP3YDR046C 1815 nt6.97□□□□□ -1.29
RPL35AP0CX84 YHR218WYHR218W 1812 nt6.97□□□□□ -1.29
RPL35AP0CX84 OCH1YGL038C 1443 nt6.96□□□□□ -1.3
RPL35AP0CX84 SMC5YOL034W 3282 nt6.96□□□□□ -1.3
RPL35AP0CX84 CAK1YFL029C 1107 nt6.95□□□□□ -1.3
RPL35AP0CX84 MET22YOL064C 1074 nt6.95□□□□□ -1.3
RPL35AP0CX84 PDC6YGR087C 1692 nt6.95□□□□□ -1.3
RPL35AP0CX84 LAS17YOR181W 1902 nt6.95□□□□□ -1.3
RPL35AP0CX84 CMK2YOL016C 1344 nt6.95□□□□□ -1.3
RPL35AP0CX84 YER156CYER156C 1017 nt6.94□□□□□ -1.3
RPL35AP0CX84 CRN1YLR429W 1956 nt6.94□□□□□ -1.3
RPL35AP0CX84 HEL1YKR017C 1656 nt6.93□□□□□ -1.3
RPL35AP0CX84 BEM1YBR200W 1656 nt6.93□□□□□ -1.3
RPL35AP0CX84 HRA1HRA1 564 nt6.93□□□□□ -1.3
RPL35AP0CX84 MFT1YML062C 1179 nt6.93□□□□□ -1.3
RPL35AP0CX84 BUB2YMR055C 921 nt6.93□□□□□ -1.3
RPL35AP0CX84 YMC2YBR104W 990 nt6.93□□□□□ -1.3
RPL35AP0CX84 FIT1YDR534C 1587 nt6.92□□□□□ -1.3
RPL35AP0CX84 MRP1YDR347W 966 nt6.92□□□□□ -1.3
RPL35AP0CX84 EMC3YKL207W 762 nt6.92□□□□□ -1.3
RPL35AP0CX84 MRS4YKR052C 915 nt6.92□□□□□ -1.3
RPL35AP0CX84 YOR343CYOR343C 327 nt6.92□□□□□ -1.3
RPL35AP0CX84 YMR210WYMR210W 1350 nt6.92□□□□□ -1.3
RPL35AP0CX84 UBP13YBL067C 2244 nt6.92□□□□□ -1.3
RPL35AP0CX84 AGP3YFL055W 1677 nt6.91□□□□□ -1.3
RPL35AP0CX84 GRH1YDR517W 1119 nt6.91□□□□□ -1.3
RPL35AP0CX84 BUD20YLR074C 501 nt6.91□□□□□ -1.3
RPL35AP0CX84 PAU21YOR394W 495 nt6.91□□□□□ -1.3
RPL35AP0CX84 PAU22YPL282C 495 nt6.91□□□□□ -1.3
RPL35AP0CX84 YPR084WYPR084W 1371 nt6.91□□□□□ -1.3
RPL35AP0CX84 RPL12BYDR418W 498 nt6.89□□□□□ -1.31
RPL35AP0CX84 GDH1YOR375C 1365 nt6.88□□□□□ -1.31
RPL35AP0CX84 YPT31YER031C 672 nt6.88□□□□□ -1.31
RPL35AP0CX84 RNA170RNA170 169 nt6.88□□□□□ -1.31
RPL35AP0CX84 DAL7YIR031C 1665 nt6.87□□□□□ -1.31
RPL35AP0CX84 YEN1YER041W 2280 nt6.87□□□□□ -1.31
RPL35AP0CX84 AFG2YLR397C 2343 nt6.87□□□□□ -1.31
RPL35AP0CX84 ADA2YDR448W 1305 nt6.85□□□□□ -1.31
RPL35AP0CX84 YJL009WYJL009W 327 nt6.85□□□□□ -1.31
RPL35AP0CX84 TAD2YJL035C 753 nt6.85□□□□□ -1.31
RPL35AP0CX84 YAL016C-AYAL016C-A 315 nt6.85□□□□□ -1.31
RPL35AP0CX84 YJR149WYJR149W 1215 nt6.85□□□□□ -1.31
RPL35AP0CX84 PMU1YKL128C 888 nt6.85□□□□□ -1.31
RPL35AP0CX84 YMR206WYMR206W 942 nt6.85□□□□□ -1.31
RPL35AP0CX84 Q0010Q0010 387 nt6.85□□□□□ -1.31
RPL35AP0CX84 YBR056WYBR056W 1506 nt6.85□□□□□ -1.31
RPL35AP0CX84 NPP2YEL016C 1482 nt6.85□□□□□ -1.31
RPL35AP0CX84 ATP2YJR121W 1536 nt6.84□□□□□ -1.31
RPL35AP0CX84 PET18YCR020C 648 nt6.83□□□□□ -1.32
RPL35AP0CX84 YCR061WYCR061W 1896 nt6.83□□□□□ -1.32
RPL35AP0CX84 CIR2YOR356W 1896 nt6.81□□□□□ -1.32
RPL35AP0CX84 GGC1YDL198C 903 nt6.81□□□□□ -1.32
RPL35AP0CX84 PUP3YER094C 618 nt6.81□□□□□ -1.32
RPL35AP0CX84 BXI1YNL305C 894 nt6.81□□□□□ -1.32
RPL35AP0CX84 RHO1YPR165W 630 nt6.81□□□□□ -1.32
RPL35AP0CX84 CKI1YLR133W 1749 nt6.81□□□□□ -1.32
RPL35AP0CX84 CBK1YNL161W 2271 nt6.8□□□□□ -1.32
RPL35AP0CX84 YIL108WYIL108W 2091 nt6.8□□□□□ -1.32
RPL35AP0CX84 CTF3YLR381W 2202 nt6.8□□□□□ -1.32
RPL35AP0CX84 AAT1YKL106W 1356 nt6.8□□□□□ -1.32
RPL35AP0CX84 snR86snR86 1004 nt6.78□□□□□ -1.32
RPL35AP0CX84 TDH1YJL052W 999 nt6.78□□□□□ -1.32
RPL35AP0CX84 MGM101YJR144W 810 nt6.78□□□□□ -1.32
RPL35AP0CX84 PRE10YOR362C 867 nt6.78□□□□□ -1.32
RPL35AP0CX84 RPS6AYPL090C 711 nt6.78□□□□□ -1.32
RPL35AP0CX84 RPS6BYBR181C 711 nt6.78□□□□□ -1.32
RPL35AP0CX84 YOS9YDR057W 1629 nt6.78□□□□□ -1.32
RPL35AP0CX84 NBA1YOL070C 1506 nt6.77□□□□□ -1.33
RPL35AP0CX84 RCF1YML030W 480 nt6.77□□□□□ -1.33
RPL35AP0CX84 ADH6YMR318C 1083 nt6.77□□□□□ -1.33
RPL35AP0CX84 NMD5YJR132W 3147 nt6.76□□□□□ -1.33
RPL35AP0CX84 TIM50YPL063W 1431 nt6.76□□□□□ -1.33
RPL35AP0CX84 ASN2YGR124W 1719 nt6.76□□□□□ -1.33
RPL35AP0CX84 MSB3YNL293W 1902 nt6.76□□□□□ -1.33
RPL35AP0CX84 EDC2YER035W 438 nt6.76□□□□□ -1.33
RPL35AP0CX84 ELP4YPL101W 1371 nt6.76□□□□□ -1.33
RPL35AP0CX84 EHT1YBR177C 1356 nt6.76□□□□□ -1.33
RPL35AP0CX84 THI73YLR004C 1572 nt6.76□□□□□ -1.33
RPL35AP0CX84 UTR5YEL035C 501 nt6.75□□□□□ -1.33
RPL35AP0CX84 YGR137WYGR137W 375 nt6.75□□□□□ -1.33
RPL35AP0CX84 HAL5YJL165C 2568 nt6.73□□□□□ -1.33
RPL35AP0CX84 NDE2YDL085W 1638 nt6.73□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms