Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHGBP05060 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
CHGBP05060 LINC01971-201ENST00000617888 1048 ntBASIC31.12■■■□□ 2.57
CHGBP05060 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHGBP05060 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
CHGBP05060 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.11■■■□□ 2.57
CHGBP05060 DUX4L11-201ENST00000611504 1267 ntBASIC31.11■■■□□ 2.57
CHGBP05060 DUX4L12-201ENST00000614593 1267 ntBASIC31.11■■■□□ 2.57
CHGBP05060 DUX4L14-201ENST00000621227 1267 ntBASIC31.11■■■□□ 2.57
CHGBP05060 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CHGBP05060 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.11■■■□□ 2.57
CHGBP05060 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.1■■■□□ 2.57
CHGBP05060 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.1■■■□□ 2.57
CHGBP05060 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CHGBP05060 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHGBP05060 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHGBP05060 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.08■■■□□ 2.57
CHGBP05060 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.07■■■□□ 2.56
CHGBP05060 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
CHGBP05060 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
CHGBP05060 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.07■■■□□ 2.56
CHGBP05060 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CHGBP05060 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHGBP05060 AC100797.4-201ENST00000631653 1827 ntBASIC31.06■■■□□ 2.56
CHGBP05060 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
CHGBP05060 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CHGBP05060 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.04■■■□□ 2.56
CHGBP05060 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHGBP05060 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.04■■■□□ 2.56
CHGBP05060 CR559946.2-201ENST00000623684 991 ntBASIC31.04■■■□□ 2.56
CHGBP05060 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHGBP05060 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHGBP05060 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.03■■■□□ 2.56
CHGBP05060 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHGBP05060 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.02■■■□□ 2.56
CHGBP05060 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.01■■■□□ 2.56
CHGBP05060 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.01■■■□□ 2.56
CHGBP05060 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHGBP05060 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.01■■■□□ 2.55
CHGBP05060 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHGBP05060 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31■■■□□ 2.55
CHGBP05060 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31■■■□□ 2.55
CHGBP05060 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHGBP05060 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
CHGBP05060 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHGBP05060 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.99■■■□□ 2.55
CHGBP05060 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHGBP05060 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CHGBP05060 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHGBP05060 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.97■■■□□ 2.55
CHGBP05060 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.97■■■□□ 2.55
CHGBP05060 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.97■■■□□ 2.55
CHGBP05060 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L13-201ENST00000554103 1267 ntBASIC30.97■■■□□ 2.55
CHGBP05060 MIR3648-2-201ENST00000581792 180 ntBASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L15-201ENST00000611059 1267 ntBASIC30.97■■■□□ 2.55
CHGBP05060 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L23-201ENST00000615195 1269 ntBASIC30.97■■■□□ 2.55
CHGBP05060 MIR3648-1-201ENST00000615959 180 ntBASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L24-201ENST00000617576 1269 ntBASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L22-201ENST00000618238 1269 ntBASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L20-201ENST00000619712 1269 ntBASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L21-201ENST00000622058 1269 ntBASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L10-201ENST00000622460 1267 ntBASIC30.97■■■□□ 2.55
CHGBP05060 DUX4L25-201ENST00000624915 1269 ntBASIC30.97■■■□□ 2.55
CHGBP05060 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHGBP05060 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CHGBP05060 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CHGBP05060 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.96■■■□□ 2.55
CHGBP05060 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.96■■■□□ 2.55
CHGBP05060 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.96■■■□□ 2.55
CHGBP05060 AC016575.1-201ENST00000607026 382 ntBASIC30.96■■■□□ 2.55
CHGBP05060 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.96■■■□□ 2.55
CHGBP05060 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CHGBP05060 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHGBP05060 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHGBP05060 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.95■■■□□ 2.55
CHGBP05060 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.95■■■□□ 2.54
CHGBP05060 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.94■■■□□ 2.54
CHGBP05060 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.94■■■□□ 2.54
CHGBP05060 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.94■■■□□ 2.54
CHGBP05060 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.94■■■□□ 2.54
CHGBP05060 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
CHGBP05060 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CHGBP05060 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.94■■■□□ 2.54
CHGBP05060 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHGBP05060 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
CHGBP05060 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.93■■■□□ 2.54
CHGBP05060 AP004833.2-201ENST00000532228 1454 ntBASIC30.93■■■□□ 2.54
CHGBP05060 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
CHGBP05060 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHGBP05060 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHGBP05060 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHGBP05060 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
CHGBP05060 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CHGBP05060 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHGBP05060 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHGBP05060 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.9■■■□□ 2.54
CHGBP05060 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHGBP05060 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms