Protein–RNA interactions for Protein: O75438

NDUFB1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1O75438 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NDUFB1O75438 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFB1O75438 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NDUFB1O75438 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NDUFB1O75438 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFB1O75438 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFB1O75438 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NDUFB1O75438 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFB1O75438 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NDUFB1O75438 SNAI3-AS1-204ENST00000567997 2048 ntBASIC15.22■□□□□ 0.03
NDUFB1O75438 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFB1O75438 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFB1O75438 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFB1O75438 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFB1O75438 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFB1O75438 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NDUFB1O75438 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NDUFB1O75438 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NDUFB1O75438 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NDUFB1O75438 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFB1O75438 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFB1O75438 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFB1O75438 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NDUFB1O75438 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NDUFB1O75438 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NDUFB1O75438 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFB1O75438 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFB1O75438 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFB1O75438 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFB1O75438 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NDUFB1O75438 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFB1O75438 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFB1O75438 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NDUFB1O75438 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NDUFB1O75438 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC15.17■□□□□ 0.02
NDUFB1O75438 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFB1O75438 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDUFB1O75438 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC15.16■□□□□ 0.02
NDUFB1O75438 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
NDUFB1O75438 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NDUFB1O75438 AL135925.1-201ENST00000605920 1701 ntBASIC15.16■□□□□ 0.02
NDUFB1O75438 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFB1O75438 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDUFB1O75438 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFB1O75438 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFB1O75438 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFB1O75438 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFB1O75438 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFB1O75438 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDUFB1O75438 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NDUFB1O75438 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC15.14■□□□□ 0.01
NDUFB1O75438 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC15.14■□□□□ 0.01
NDUFB1O75438 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFB1O75438 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFB1O75438 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFB1O75438 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NDUFB1O75438 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NDUFB1O75438 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NDUFB1O75438 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFB1O75438 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFB1O75438 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFB1O75438 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFB1O75438 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFB1O75438 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NDUFB1O75438 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFB1O75438 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFB1O75438 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFB1O75438 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFB1O75438 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFB1O75438 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFB1O75438 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFB1O75438 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NDUFB1O75438 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFB1O75438 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFB1O75438 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFB1O75438 PKM-203ENST00000389093 2279 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFB1O75438 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
NDUFB1O75438 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFB1O75438 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFB1O75438 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFB1O75438 PKD1P6-201ENST00000343738 4769 ntBASIC15.09■□□□□ 0.01
NDUFB1O75438 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
NDUFB1O75438 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NDUFB1O75438 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NDUFB1O75438 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDUFB1O75438 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.08■□□□□ 0
NDUFB1O75438 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC15.08■□□□□ 0
NDUFB1O75438 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFB1O75438 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFB1O75438 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms