Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZNF253O75346 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF253O75346 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF253O75346 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF253O75346 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF253O75346 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF253O75346 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF253O75346 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF253O75346 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF253O75346 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF253O75346 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF253O75346 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF253O75346 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF253O75346 RARRES2P7-201ENST00000567349 469 ntBASIC19.67■□□□□ 0.74
ZNF253O75346 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF253O75346 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF253O75346 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF253O75346 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF253O75346 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF253O75346 SETD8P1-201ENST00000623146 1180 ntBASIC19.65■□□□□ 0.74
ZNF253O75346 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF253O75346 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF253O75346 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF253O75346 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF253O75346 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF253O75346 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF253O75346 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ZNF253O75346 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.64■□□□□ 0.73
ZNF253O75346 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ZNF253O75346 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF253O75346 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF253O75346 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF253O75346 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ZNF253O75346 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF253O75346 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF253O75346 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF253O75346 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF253O75346 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF253O75346 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF253O75346 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF253O75346 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF253O75346 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF253O75346 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF253O75346 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF253O75346 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF253O75346 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF253O75346 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF253O75346 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF253O75346 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF253O75346 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF253O75346 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF253O75346 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ZNF253O75346 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF253O75346 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
ZNF253O75346 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF253O75346 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF253O75346 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF253O75346 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
ZNF253O75346 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF253O75346 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF253O75346 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ZNF253O75346 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
ZNF253O75346 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.58■□□□□ 0.72
ZNF253O75346 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF253O75346 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF253O75346 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ZNF253O75346 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF253O75346 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF253O75346 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNF253O75346 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF253O75346 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF253O75346 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNF253O75346 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ZNF253O75346 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF253O75346 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF253O75346 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF253O75346 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF253O75346 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF253O75346 BX255925.1-201ENST00000566954 1854 ntBASIC19.55■□□□□ 0.72
ZNF253O75346 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.55■□□□□ 0.72
ZNF253O75346 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF253O75346 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ZNF253O75346 AL391121.1-201ENST00000607967 1349 ntBASIC19.54■□□□□ 0.72
ZNF253O75346 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF253O75346 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF253O75346 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF253O75346 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ZNF253O75346 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF253O75346 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF253O75346 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF253O75346 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF253O75346 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF253O75346 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF253O75346 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF253O75346 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF253O75346 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
ZNF253O75346 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF253O75346 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF253O75346 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF253O75346 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms