Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PRAF2O60831 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PRAF2O60831 AC091060.1-201ENST00000623524 1766 ntBASIC21.7■■□□□ 1.06
PRAF2O60831 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAF2O60831 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
PRAF2O60831 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.7■■□□□ 1.06
PRAF2O60831 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PRAF2O60831 LINC01003-201ENST00000564834 1764 ntBASIC21.69■■□□□ 1.06
PRAF2O60831 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAF2O60831 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.69■■□□□ 1.06
PRAF2O60831 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PRAF2O60831 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAF2O60831 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAF2O60831 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAF2O60831 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAF2O60831 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAF2O60831 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAF2O60831 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAF2O60831 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PRAF2O60831 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAF2O60831 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAF2O60831 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAF2O60831 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAF2O60831 AC020928.2-201ENST00000588717 2197 ntBASIC21.65■■□□□ 1.06
PRAF2O60831 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAF2O60831 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PRAF2O60831 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAF2O60831 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAF2O60831 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAF2O60831 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PRAF2O60831 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAF2O60831 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAF2O60831 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRAF2O60831 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.06
PRAF2O60831 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRAF2O60831 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.64■■□□□ 1.06
PRAF2O60831 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAF2O60831 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAF2O60831 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAF2O60831 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAF2O60831 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAF2O60831 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PRAF2O60831 AC093323.1-202ENST00000635031 2045 ntBASIC21.62■■□□□ 1.05
PRAF2O60831 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.61■■□□□ 1.05
PRAF2O60831 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAF2O60831 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.61■■□□□ 1.05
PRAF2O60831 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAF2O60831 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAF2O60831 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAF2O60831 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.61■■□□□ 1.05
PRAF2O60831 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAF2O60831 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAF2O60831 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAF2O60831 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRAF2O60831 AC145676.1-201ENST00000514988 2004 ntBASIC21.59■■□□□ 1.05
PRAF2O60831 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.59■■□□□ 1.05
PRAF2O60831 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.58■■□□□ 1.05
PRAF2O60831 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRAF2O60831 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRAF2O60831 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRAF2O60831 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.58■■□□□ 1.04
PRAF2O60831 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRAF2O60831 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.57■■□□□ 1.04
PRAF2O60831 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRAF2O60831 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAF2O60831 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAF2O60831 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAF2O60831 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAF2O60831 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PRAF2O60831 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAF2O60831 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.56■■□□□ 1.04
PRAF2O60831 AP004833.2-201ENST00000532228 1454 ntBASIC21.55■■□□□ 1.04
PRAF2O60831 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRAF2O60831 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRAF2O60831 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAF2O60831 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAF2O60831 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
PRAF2O60831 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAF2O60831 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.54■■□□□ 1.04
PRAF2O60831 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAF2O60831 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAF2O60831 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PRAF2O60831 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAF2O60831 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PRAF2O60831 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.53■■□□□ 1.04
PRAF2O60831 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAF2O60831 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.53■■□□□ 1.04
PRAF2O60831 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAF2O60831 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAF2O60831 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PRAF2O60831 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.52■■□□□ 1.04
PRAF2O60831 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PRAF2O60831 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PRAF2O60831 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PRAF2O60831 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAF2O60831 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRAF2O60831 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAF2O60831 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.5■■□□□ 1.03
PRAF2O60831 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PRAF2O60831 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms