Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NDUFB3O43676 ABCB10P3-201ENST00000561950 2166 ntBASIC21.39■■□□□ 1.01
NDUFB3O43676 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NDUFB3O43676 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NDUFB3O43676 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NDUFB3O43676 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.38■■□□□ 1.01
NDUFB3O43676 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NDUFB3O43676 MIR7108-201ENST00000614319 87 ntBASIC21.37■■□□□ 1.01
NDUFB3O43676 WHAMMP2-203ENST00000563942 1603 ntBASIC21.37■■□□□ 1.01
NDUFB3O43676 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NDUFB3O43676 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NDUFB3O43676 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.36■■□□□ 1.01
NDUFB3O43676 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NDUFB3O43676 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NDUFB3O43676 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NDUFB3O43676 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NDUFB3O43676 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NDUFB3O43676 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.35■■□□□ 1.01
NDUFB3O43676 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NDUFB3O43676 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.34■■□□□ 1.01
NDUFB3O43676 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFB3O43676 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
NDUFB3O43676 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFB3O43676 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.33■■□□□ 1.01
NDUFB3O43676 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.33■■□□□ 1.01
NDUFB3O43676 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.32■■□□□ 1
NDUFB3O43676 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFB3O43676 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.32■■□□□ 1
NDUFB3O43676 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.32■■□□□ 1
NDUFB3O43676 DUX4L11-201ENST00000611504 1267 ntBASIC21.32■■□□□ 1
NDUFB3O43676 DUX4L12-201ENST00000614593 1267 ntBASIC21.32■■□□□ 1
NDUFB3O43676 DUX4L14-201ENST00000621227 1267 ntBASIC21.32■■□□□ 1
NDUFB3O43676 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.32■■□□□ 1
NDUFB3O43676 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFB3O43676 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.31■■□□□ 1
NDUFB3O43676 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NDUFB3O43676 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFB3O43676 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.31■■□□□ 1
NDUFB3O43676 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.31■■□□□ 1
NDUFB3O43676 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.3■■□□□ 1
NDUFB3O43676 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
NDUFB3O43676 AC139426.1-201ENST00000568218 2529 ntBASIC21.29■■□□□ 1
NDUFB3O43676 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFB3O43676 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.29■■□□□ 1
NDUFB3O43676 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NDUFB3O43676 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFB3O43676 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFB3O43676 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.28■■□□□ 1
NDUFB3O43676 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.28■■□□□ 1
NDUFB3O43676 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.27■■□□□ 1
NDUFB3O43676 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.27■■□□□ 1
NDUFB3O43676 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NDUFB3O43676 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.27■■□□□ 1
NDUFB3O43676 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.26■□□□□ 0.99
NDUFB3O43676 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFB3O43676 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NDUFB3O43676 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFB3O43676 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.26■□□□□ 0.99
NDUFB3O43676 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.26■□□□□ 0.99
NDUFB3O43676 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NDUFB3O43676 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L13-201ENST00000554103 1267 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L15-201ENST00000611059 1267 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L23-201ENST00000615195 1269 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L24-201ENST00000617576 1269 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L22-201ENST00000618238 1269 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L20-201ENST00000619712 1269 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L21-201ENST00000622058 1269 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L10-201ENST00000622460 1267 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 DUX4L25-201ENST00000624915 1269 ntBASIC21.26■□□□□ 0.99
NDUFB3O43676 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NDUFB3O43676 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.26■□□□□ 0.99
NDUFB3O43676 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.26■□□□□ 0.99
NDUFB3O43676 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFB3O43676 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.25■□□□□ 0.99
NDUFB3O43676 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.25■□□□□ 0.99
NDUFB3O43676 AC100797.4-201ENST00000631653 1827 ntBASIC21.25■□□□□ 0.99
NDUFB3O43676 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFB3O43676 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFB3O43676 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFB3O43676 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFB3O43676 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFB3O43676 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.23■□□□□ 0.99
NDUFB3O43676 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFB3O43676 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFB3O43676 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
NDUFB3O43676 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFB3O43676 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.22■□□□□ 0.99
NDUFB3O43676 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFB3O43676 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFB3O43676 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFB3O43676 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFB3O43676 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFB3O43676 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFB3O43676 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.21■□□□□ 0.99
NDUFB3O43676 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFB3O43676 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFB3O43676 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFB3O43676 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.21■□□□□ 0.99
NDUFB3O43676 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms