Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFA4O00483 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NDUFA4O00483 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.7■□□□□ 0.74
NDUFA4O00483 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
NDUFA4O00483 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NDUFA4O00483 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDUFA4O00483 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NDUFA4O00483 DUX4L29-201ENST00000425409 679 ntBASIC19.69■□□□□ 0.74
NDUFA4O00483 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDUFA4O00483 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NDUFA4O00483 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDUFA4O00483 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.69■□□□□ 0.74
NDUFA4O00483 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.69■□□□□ 0.74
NDUFA4O00483 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NDUFA4O00483 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.68■□□□□ 0.74
NDUFA4O00483 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.68■□□□□ 0.74
NDUFA4O00483 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDUFA4O00483 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.68■□□□□ 0.74
NDUFA4O00483 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDUFA4O00483 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NDUFA4O00483 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDUFA4O00483 DRD5P2-201ENST00000421395 2012 ntBASIC19.68■□□□□ 0.74
NDUFA4O00483 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDUFA4O00483 AC142086.6-201ENST00000621154 1765 ntBASIC19.67■□□□□ 0.74
NDUFA4O00483 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDUFA4O00483 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.67■□□□□ 0.74
NDUFA4O00483 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDUFA4O00483 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDUFA4O00483 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDUFA4O00483 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDUFA4O00483 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDUFA4O00483 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDUFA4O00483 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDUFA4O00483 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NDUFA4O00483 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDUFA4O00483 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.65■□□□□ 0.74
NDUFA4O00483 WHAMMP2-203ENST00000563942 1603 ntBASIC19.65■□□□□ 0.74
NDUFA4O00483 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
NDUFA4O00483 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDUFA4O00483 AC021231.2-201ENST00000594613 730 ntBASIC19.65■□□□□ 0.74
NDUFA4O00483 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDUFA4O00483 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.65■□□□□ 0.74
NDUFA4O00483 AC100797.4-201ENST00000631653 1827 ntBASIC19.65■□□□□ 0.74
NDUFA4O00483 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDUFA4O00483 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.64■□□□□ 0.73
NDUFA4O00483 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.64■□□□□ 0.73
NDUFA4O00483 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NDUFA4O00483 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDUFA4O00483 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDUFA4O00483 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.63■□□□□ 0.73
NDUFA4O00483 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.63■□□□□ 0.73
NDUFA4O00483 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDUFA4O00483 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NDUFA4O00483 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.62■□□□□ 0.73
NDUFA4O00483 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NDUFA4O00483 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDUFA4O00483 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NDUFA4O00483 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NDUFA4O00483 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDUFA4O00483 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDUFA4O00483 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDUFA4O00483 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDUFA4O00483 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.61■□□□□ 0.73
NDUFA4O00483 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDUFA4O00483 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDUFA4O00483 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDUFA4O00483 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.59■□□□□ 0.73
NDUFA4O00483 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDUFA4O00483 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NDUFA4O00483 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.59■□□□□ 0.73
NDUFA4O00483 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.59■□□□□ 0.73
NDUFA4O00483 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.59■□□□□ 0.73
NDUFA4O00483 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDUFA4O00483 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDUFA4O00483 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDUFA4O00483 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NDUFA4O00483 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.58■□□□□ 0.73
NDUFA4O00483 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.58■□□□□ 0.72
NDUFA4O00483 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.58■□□□□ 0.72
NDUFA4O00483 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.58■□□□□ 0.72
NDUFA4O00483 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.58■□□□□ 0.72
NDUFA4O00483 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDUFA4O00483 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDUFA4O00483 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDUFA4O00483 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDUFA4O00483 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDUFA4O00483 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.56■□□□□ 0.72
NDUFA4O00483 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDUFA4O00483 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDUFA4O00483 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.55■□□□□ 0.72
NDUFA4O00483 AP002414.2-202ENST00000590929 1450 ntBASIC19.55■□□□□ 0.72
NDUFA4O00483 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NDUFA4O00483 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.55■□□□□ 0.72
NDUFA4O00483 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NDUFA4O00483 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.55■□□□□ 0.72
NDUFA4O00483 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NDUFA4O00483 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NDUFA4O00483 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.54■□□□□ 0.72
NDUFA4O00483 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDUFA4O00483 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms