Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 MIR3665-201ENST00000578708 105 ntBASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 AP006261.1-201ENST00000584783 668 ntBASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 DUX4L28-201ENST00000623687 678 ntBASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFPL4AA6NLU0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFPL4AA6NLU0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFPL4AA6NLU0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.95■■□□□ 1.1
RFPL4AA6NLU0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RFPL4AA6NLU0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFPL4AA6NLU0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RFPL4AA6NLU0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFPL4AA6NLU0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.94■■□□□ 1.1
RFPL4AA6NLU0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.94■■□□□ 1.1
RFPL4AA6NLU0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.94■■□□□ 1.1
RFPL4AA6NLU0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFPL4AA6NLU0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFPL4AA6NLU0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFPL4AA6NLU0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFPL4AA6NLU0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFPL4AA6NLU0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFPL4AA6NLU0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RFPL4AA6NLU0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFPL4AA6NLU0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.91■■□□□ 1.1
RFPL4AA6NLU0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFPL4AA6NLU0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RFPL4AA6NLU0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFPL4AA6NLU0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.1
RFPL4AA6NLU0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFPL4AA6NLU0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFPL4AA6NLU0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.89■■□□□ 1.09
RFPL4AA6NLU0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RFPL4AA6NLU0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFPL4AA6NLU0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFPL4AA6NLU0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RFPL4AA6NLU0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFPL4AA6NLU0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.88■■□□□ 1.09
RFPL4AA6NLU0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.88■■□□□ 1.09
RFPL4AA6NLU0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFPL4AA6NLU0 DRD5P2-201ENST00000421395 2012 ntBASIC21.87■■□□□ 1.09
RFPL4AA6NLU0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFPL4AA6NLU0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFPL4AA6NLU0 AL162393.1-201ENST00000437852 946 ntBASIC21.87■■□□□ 1.09
RFPL4AA6NLU0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.86■■□□□ 1.09
RFPL4AA6NLU0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFPL4AA6NLU0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.86■■□□□ 1.09
RFPL4AA6NLU0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.86■■□□□ 1.09
RFPL4AA6NLU0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFPL4AA6NLU0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFPL4AA6NLU0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RFPL4AA6NLU0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RFPL4AA6NLU0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.85■■□□□ 1.09
RFPL4AA6NLU0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFPL4AA6NLU0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RFPL4AA6NLU0 AL139393.2-201ENST00000608721 2025 ntBASIC21.84■■□□□ 1.09
RFPL4AA6NLU0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RFPL4AA6NLU0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFPL4AA6NLU0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.84■■□□□ 1.09
RFPL4AA6NLU0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
RFPL4AA6NLU0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFPL4AA6NLU0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFPL4AA6NLU0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.83■■□□□ 1.09
RFPL4AA6NLU0 AC108673.1-201ENST00000510422 1159 ntBASIC21.83■■□□□ 1.09
RFPL4AA6NLU0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFPL4AA6NLU0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL4AA6NLU0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL4AA6NLU0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL4AA6NLU0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.82■■□□□ 1.08
RFPL4AA6NLU0 AC087741.3-201ENST00000624270 1347 ntBASIC21.81■■□□□ 1.08
RFPL4AA6NLU0 AC127502.1-201ENST00000399971 1502 ntBASIC21.81■■□□□ 1.08
RFPL4AA6NLU0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFPL4AA6NLU0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.81■■□□□ 1.08
RFPL4AA6NLU0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFPL4AA6NLU0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFPL4AA6NLU0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL4AA6NLU0 MIR6090-201ENST00000622481 60 ntBASIC21.79■■□□□ 1.08
RFPL4AA6NLU0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL4AA6NLU0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL4AA6NLU0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.78■■□□□ 1.08
RFPL4AA6NLU0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL4AA6NLU0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL4AA6NLU0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.77■■□□□ 1.08
RFPL4AA6NLU0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.77■■□□□ 1.08
RFPL4AA6NLU0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL4AA6NLU0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL4AA6NLU0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RFPL4AA6NLU0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RFPL4AA6NLU0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RFPL4AA6NLU0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFPL4AA6NLU0 AC044849.2-201ENST00000606596 710 ntBASIC21.74■■□□□ 1.07
RFPL4AA6NLU0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFPL4AA6NLU0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL4AA6NLU0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL4AA6NLU0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms